WormBase Tree Display for Gene: WBGene00019543
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| WBGene00019543 | SMap | S_parent | Sequence | K08F11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cif-1 | Paper_evidence | WBPaper00029237 | |||||
| Sequence_name | K08F11.3 | ||||||||
| Molecular_name | K08F11.3 | ||||||||
| K08F11.3.1 | |||||||||
| CE11954 | |||||||||
| K08F11.3.2 | |||||||||
| Other_name | CELE_K08F11.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | cif-1 | ||||||||
| DB_info | Database | AceView | gene | 4F472 | |||||
| WormQTL | gene | WBGene00019543 | |||||||
| WormFlux | gene | WBGene00019543 | |||||||
| NDB | locus_tag | CELE_K08F11.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019543|UniProtKB=Q94261 | |||||||
| family | PTHR15350 | ||||||||
| NCBI | gene | 177236 | |||||||
| RefSeq | protein | NM_068217.7 | |||||||
| SwissProt | UniProtAcc | Q94261 | |||||||
| TREEFAM | TREEFAM_ID | TF106148 | |||||||
| UniProt_GCRP | UniProtAcc | Q94261 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 13 Apr 2007 16:02:30 | WBPerson2970 | Name_change | CGC_name | cif-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cif | ||||||||
| Allele (49) | |||||||||
| Strain | WBStrain00036432 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (21) | |||||||||
| Contained_in_operon | CEOP4140 | ||||||||
| Ortholog (31) | |||||||||
| Structured_description | Automated_description | Predicted to enable translation initiation factor activity. Predicted to be involved in cytoplasmic translational initiation. Predicted to be located in cytoplasm. Predicted to be part of eukaryotic translation initiation factor 3 complex. Is an ortholog of human EIF3M (eukaryotic translation initiation factor 3 subunit M). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K08F11.3 | |||||||
| Corresponding_transcript | K08F11.3.1 | ||||||||
| K08F11.3.2 | |||||||||
| Other_sequence (38) | |||||||||
| Associated_feature | WBsf667900 | ||||||||
| WBsf996375 | |||||||||
| WBsf996376 | |||||||||
| WBsf996377 | |||||||||
| WBsf1017302 | |||||||||
| WBsf1017303 | |||||||||
| WBsf229998 | |||||||||
| WBsf229999 | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr1028784 | ||||||||
| Expr1038446 | |||||||||
| Expr1154015 | |||||||||
| Expr2010013 | |||||||||
| Expr2028254 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (128) | |||||||||
| Interaction (122) | |||||||||
| Map_info | Map | IV | Position | 0.68613 | Error | 0.002646 | |||
| Positive | Positive_clone | K08F11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00029237 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00048416 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
