WormBase Tree Display for Gene: WBGene00019571
expand all nodes | collapse all nodes | view schema
| WBGene00019571 | SMap | S_parent | Sequence | K09E2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | K09E2.2 | |||||||
| Molecular_name | K09E2.2a | ||||||||
| K09E2.2a.1 | |||||||||
| CE40093 | |||||||||
| K09E2.2b | |||||||||
| CE52862 | |||||||||
| K09E2.2b.1 | |||||||||
| Other_name | CELE_K09E2.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | K09E2.2 | ||||||||
| DB_info | Database | AceView | gene | XJ297 | |||||
| WormQTL | gene | WBGene00019571 | |||||||
| WormFlux | gene | WBGene00019571 | |||||||
| NDB | locus_tag | CELE_K09E2.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019571|UniProtKB=Q21393 | |||||||
| family | PTHR20929 | ||||||||
| NCBI | gene | 187216 | |||||||
| RefSeq | protein | NM_077067.6 | |||||||
| NM_001368525.3 | |||||||||
| TrEMBL | UniProtAcc | A0A3P6PB36 | |||||||
| Q21393 | |||||||||
| UniProt_GCRP | UniProtAcc | Q21393 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (106) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00003463 | ||||||||
| 00003464 | |||||||||
| 00003465 | |||||||||
| Contained_in_operon | CEOPX151 | ||||||||
| Ortholog (18) | |||||||||
| Structured_description | Automated_description | Predicted to enable beta-tubulin binding activity and microtubule binding activity. Predicted to be located in axoneme. Is an ortholog of human DNAI7 (dynein axonemal intermediate chain 7). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K09E2.2a | |||||||
| K09E2.2b | |||||||||
| Corresponding_CDS_history | K09E2.2:wp129 | ||||||||
| K09E2.2:wp156 | |||||||||
| Corresponding_transcript | K09E2.2a.1 | ||||||||
| K09E2.2b.1 | |||||||||
| Associated_feature | WBsf663054 | ||||||||
| WBsf663055 | |||||||||
| WBsf1006220 | |||||||||
| WBsf1006221 | |||||||||
| WBsf1023451 | |||||||||
| WBsf1023452 | |||||||||
| WBsf236077 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00016910 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00050421 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012074 | ||||||||
| Expr1154126 | |||||||||
| Expr2004972 | |||||||||
| Expr2023193 | |||||||||
| Drives_construct | WBCnstr00025760 | ||||||||
| Construct_product | WBCnstr00025760 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (49) | |||||||||
| SAGE_tag | SAGE:agaattatgtaacacca | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| SAGE:aaaaaatatcctcttga | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:ttttgagcaa | Strand | Antisense | |||||||
| SAGE:gaaactgtgc | Strand | Antisense | |||||||
| SAGE:gattctttgttttttcc | Strand | Antisense | |||||||
| SAGE:tttttcaaat | Strand | Antisense | |||||||
| SAGE:acattgtgaa | Strand | Antisense | |||||||
| SAGE:gaaactgttg | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:aaaaaatatc | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| Interaction (17) | |||||||||
| Map_info | Positive | Positive_clone | K09E2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 0.213635 | |||||||
| Method | Gene |
