WormBase Tree Display for Gene: WBGene00019748

WBGene00019748 SMap: S_parent: Sequence: M03A8
  Identity: Version: 2
    Name: CGC_name: atg-2 Person_evidence: WBPerson649
      Sequence_name: M03A8.2
      Molecular_name: M03A8.2
        M03A8.2.1
        CE47193
        M03A8.2.2
      Other_name: CELE_M03A8.2 Accession_evidence: NDB BX284606
      Public_name: atg-2
    DB_info: Database: AceView gene XH435
        WormQTL gene WBGene00019748
        WormFlux gene WBGene00019748
        NDB locus_tag CELE_M03A8.2
        Panther gene CAEEL|WormBase=WBGene00019748|UniProtKB=Q21480
          family PTHR13190
        NCBI gene 180949
        RefSeq protein NM_076744.10
        SwissProt UniProtAcc Q21480
        TREEFAM TREEFAM_ID TF313482
        UniProt_GCRP UniProtAcc Q21480
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 29 Feb 2008 11:29:00 WBPerson2970 Name_change: CGC_name: atg-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: atg
    Allele (174)
    Strain: WBStrain00002853
      WBStrain00008596
    RNASeq_FPKM (74)
    GO_annotation (19)
    Ortholog (44)
    Structured_description: Concise_description: atg-2 encodes a large (2,275-residue) protein orthologous to theautophagic budding yeast protein Atg2p, and to human ATG2A and ATG2B;ATG-2 is expressed in larval and adult pharynx, intestine, body wall muscles, and neurons, as well as adult reproductive system; ATG-2 has noobvious phenotype in mass RNAi assays. Paper_evidence: WBPaper00006525
            WBPaper00031006
            WBPaper00031504
          Curator_confirmed: WBPerson567
          Date_last_updated: 24 Feb 2008 00:00:00
      Automated_description: Predicted to enable phosphatidylinositol-3-phosphate binding activity. Involved in positive regulation of autophagy. Predicted to be located in phagophore assembly site. Expressed in AIYL and AIYR. Is an ortholog of human ATG2A (autophagy related 2A). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: M03A8.2
    Corresponding_CDS_history: M03A8.2:wp230
    Corresponding_transcript: M03A8.2.1
      M03A8.2.2
    Other_sequence (26)
    Associated_feature: WBsf648262
      WBsf662915
      WBsf662916
      WBsf662917
      WBsf1005648
      WBsf1005649
      WBsf1005650
      WBsf1023143
      WBsf1023144
  Experimental_info: RNAi_result: WBRNAi00050848 Inferred_automatically: RNAi_primary
      WBRNAi00099127 Inferred_automatically: RNAi_primary
      WBRNAi00092323 Inferred_automatically: RNAi_primary
      WBRNAi00092324 Inferred_automatically: RNAi_primary
      WBRNAi00034394 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr6412
      Expr12979
      Expr1020887
      Expr1038539
      Expr1154543
      Expr2009490
      Expr2027727
    Drives_construct: WBCnstr00003375
      WBCnstr00025626
      WBCnstr00038077
    Construct_product: WBCnstr00025626
    Microarray_results (20)
    Expression_cluster (149)
    Interaction (38)
  Map_info: Map: X Position: -2.41208 Error: 0.00401
    Positive: Positive_clone: M03A8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (14)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene