WormBase Tree Display for Gene: WBGene00019818
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| WBGene00019818 | SMap | S_parent | Sequence | R02C2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R02C2.7 | |||||||
| Molecular_name | R02C2.7 | ||||||||
| R02C2.7.1 | |||||||||
| CE35357 | |||||||||
| Other_name | CELE_R02C2.7 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | R02C2.7 | ||||||||
| DB_info | Database | AceView | gene | 5A720 | |||||
| WormFlux | gene | WBGene00019818 | |||||||
| NDB | locus_tag | CELE_R02C2.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019818|UniProtKB=Q7KPV8 | |||||||
| family | PTHR31664 | ||||||||
| NCBI | gene | 259611 | |||||||
| RefSeq | protein | NM_001028893.3 | |||||||
| TREEFAM | TREEFAM_ID | TF317875 | |||||||
| TrEMBL | UniProtAcc | Q7KPV8 | |||||||
| UniProt_GCRP | UniProtAcc | Q7KPV8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00009535 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010413 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011374 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00013647 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015424 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WBGene00016535 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017297 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00044514 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in pharyngeal muscle cell based on tiling array and proteomic studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on tiling array; microarray; and RNA-seq studies. Is affected by twenty-five chemicals including tryptophan; rotenone; and Tunicamycin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function (DUF4440); NTF2-like domain superfamily; and Domain of unknown function DUF4440. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R02C2.7 | |||||||
| Corresponding_transcript | R02C2.7.1 | ||||||||
| Associated_feature | WBsf652439 | ||||||||
| WBsf999104 | |||||||||
| WBsf233249 | |||||||||
| Experimental_info | Expr_pattern | Expr1012834 | |||||||
| Expr1154829 | |||||||||
| Expr2005311 | |||||||||
| Expr2023531 | |||||||||
| Drives_construct | WBCnstr00025573 | ||||||||
| Construct_product | WBCnstr00025573 | ||||||||
| Microarray_results | A_12_P146585 | ||||||||
| GPL13394_WBGene00019818 | |||||||||
| GPL13914_R02C2.7 | |||||||||
| GPL14144_R02C2.7_301-360_0.957_1_A | |||||||||
| GPL19516_CGZ0030591 | |||||||||
| GPL21109_R02C2.7 | |||||||||
| GPL8304_CE_WBGene00019818_A | |||||||||
| GPL8673_R02C2_7P00048 | |||||||||
| GPL8673_R02C2_7P00052 | |||||||||
| GPL8673_R02C2_7P00168 | |||||||||
| Expression_cluster (149) | |||||||||
| Interaction | WBInteraction000581120 | ||||||||
| Map_info | Positive | Positive_clone | R02C2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -20.0074 | |||||||
| Reference | WBPaper00062515 | ||||||||
| Method | Gene |
