WormBase Tree Display for Gene: WBGene00019867
expand all nodes | collapse all nodes | view schema
| WBGene00019867 | SMap | S_parent | Sequence | R04B3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R04B3.2 | |||||||
| Molecular_name | R04B3.2 | ||||||||
| R04B3.2.1 | |||||||||
| CE28745 | |||||||||
| Other_name | CELE_R04B3.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | R04B3.2 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00010480 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | The R04B3.2 gene encodes an ortholog of the human gene LYSOSOMAL GLYCOSYLASPARAGINASE (AGA; OMIM:208400), which when mutated leads to aspartylglucosaminuria (OMIM:208400). | Paper_evidence | WBPaper00004637 | |||||
| Curator_confirmed | WBPerson1823 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity; asparaginase activity; and beta-aspartyl-peptidase activity. Predicted to be involved in proteolysis. Predicted to be located in lysosome. Human ortholog(s) of this gene implicated in aspartylglucosaminuria. Is an ortholog of human AGA (aspartylglucosaminidase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050461 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:318) | ||||
| DOID:3211 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:318) | ||||||
| Molecular_info | Corresponding_CDS | R04B3.2 | |||||||
| Corresponding_transcript | R04B3.2.1 | ||||||||
| Other_sequence (49) | |||||||||
| Associated_feature | WBsf653751 | ||||||||
| WBsf1004345 | |||||||||
| WBsf237085 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00089130 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00093035 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017388 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034572 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051219 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023905 | ||||||||
| Expr1038616 | |||||||||
| Expr1154925 | |||||||||
| Expr2005363 | |||||||||
| Expr2023583 | |||||||||
| Drives_construct | WBCnstr00025534 | ||||||||
| Construct_product | WBCnstr00025534 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (138) | |||||||||
| Interaction (28) | |||||||||
| Map_info | Positive | Positive_clone | R04B3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -15.1615 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
