WormBase Tree Display for Gene: WBGene00019938
expand all nodes | collapse all nodes | view schema
| WBGene00019938 | SMap | S_parent | Sequence | R07E4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R07E4.5 | |||||||
| Molecular_name | R07E4.5 | ||||||||
| R07E4.5.1 | |||||||||
| CE04820 | |||||||||
| Other_name | CELE_R07E4.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | R07E4.5 | ||||||||
| DB_info | Database | AceView | gene | XG568 | |||||
| WormQTL | gene | WBGene00019938 | |||||||
| WormFlux | gene | WBGene00019938 | |||||||
| NDB | locus_tag | CELE_R07E4.5 | |||||||
| NCBI | gene | 180861 | |||||||
| RefSeq | protein | NM_076594.6 | |||||||
| TrEMBL | UniProtAcc | Q21816 | |||||||
| UniProt_GCRP | UniProtAcc | Q21816 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (42) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOPX068 | ||||||||
| Ortholog (22) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABplpaaaap; ABplpapapa; ABprpapapa; germ line; and neurons based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; dpy-10; and hsf-1 based on microarray; RNA-seq; and proteomic studies. Is affected by fifteen chemicals including bisphenol A; Alovudine; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R07E4.5 | |||||||
| Corresponding_transcript | R07E4.5.1 | ||||||||
| Other_sequence | CR11302 | ||||||||
| CJC04735_1 | |||||||||
| CR11301 | |||||||||
| CRC03945_1 | |||||||||
| CR10975 | |||||||||
| Associated_feature | WBsf654029 | ||||||||
| WBsf670568 | |||||||||
| WBsf670569 | |||||||||
| WBsf1005434 | |||||||||
| WBsf237418 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00017555 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00051476 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008238 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001801 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020831 | ||||||||
| Expr1038656 | |||||||||
| Expr1155161 | |||||||||
| Expr2005463 | |||||||||
| Expr2023684 | |||||||||
| Drives_construct | WBCnstr00025482 | ||||||||
| Construct_product | WBCnstr00025482 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (160) | |||||||||
| Interaction | WBInteraction000280070 | ||||||||
| WBInteraction000395412 | |||||||||
| WBInteraction000555323 | |||||||||
| WBInteraction000560302 | |||||||||
| WBInteraction000573894 | |||||||||
| WBInteraction000575110 | |||||||||
| Map_info | Positive | Positive_clone | R07E4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -4.01948 | |||||||
| Method | Gene |
