WormBase Tree Display for Gene: WBGene00020048

WBGene00020048 SMap: S_parent: Sequence: R13A5
  Identity: Version: 2
    Name: CGC_name: lgc-12 Paper_evidence: WBPaper00029376
          Person_evidence: WBPerson1430
      Sequence_name: R13A5.4
      Molecular_name: R13A5.4
        R13A5.4.1
        CE45150
      Other_name: CELE_R13A5.4 Accession_evidence: NDB BX284603
      Public_name: lgc-12
    DB_info: Database: AceView gene 3I653
        WormQTL gene WBGene00020048
        WormFlux gene WBGene00020048
        NDB locus_tag CELE_R13A5.4
        Panther gene CAEEL|WormBase=WBGene00020048|UniProtKB=Q95Y94
          family PTHR18945
        NCBI gene 187855
        RefSeq protein NM_066255.4
        TrEMBL UniProtAcc Q95Y94
        UniProt_GCRP UniProtAcc Q95Y94
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 18 May 2007 16:58:23 WBPerson2970 Name_change: CGC_name: lgc-12
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lgc
    Allele (30)
    Strain: WBStrain00037521
    RNASeq_FPKM (74)
    GO_annotation (17)
    Ortholog (18)
    Paralog (100)
    Structured_description: Automated_description: Predicted to enable excitatory extracellular ligand-gated monoatomic ion channel activity and transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential. Predicted to be involved in excitatory postsynaptic potential and monoatomic ion transmembrane transport. Predicted to be located in neuron projection and synapse. Expressed in mechanosensory neurons. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R13A5.4
    Corresponding_CDS_history: R13A5.4:wp176
      R13A5.4:wp216
    Corresponding_transcript: R13A5.4.1
    Other_sequence: PPC10350_1
    Associated_feature: WBsf717930
      WBsf717931
  Experimental_info: RNAi_result: WBRNAi00005520 Inferred_automatically: RNAi_primary
      WBRNAi00051891 Inferred_automatically: RNAi_primary
      WBRNAi00066354 Inferred_automatically: RNAi_primary
      WBRNAi00005880 Inferred_automatically: RNAi_primary
      WBRNAi00102735 Inferred_automatically: RNAi_primary
      WBRNAi00034917 Inferred_automatically: RNAi_primary
      WBRNAi00017819 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9891
      Expr11667
      Expr12561
      Expr1012239
      Expr1155547
      Expr2013093
      Expr2031325
    Drives_construct: WBCnstr00009829
      WBCnstr00014380
      WBCnstr00021617
      WBCnstr00025403
    Construct_product: WBCnstr00025403
    Microarray_results (17)
    Expression_cluster (87)
    Interaction: WBInteraction000337690
      WBInteraction000385545
  Map_info: Map: III Position: -0.668369 Error: 0.000357
    Positive: Positive_clone: R13A5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene