WormBase Tree Display for Gene: WBGene00020125
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| WBGene00020125 | SMap | S_parent | Sequence | R173 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cest-19 | Person_evidence | WBPerson36909 | |||||
| WBPerson7188 | |||||||||
| Sequence_name | R173.3 | ||||||||
| Molecular_name | R173.3 | ||||||||
| R173.3.1 | |||||||||
| CE47079 | |||||||||
| Other_name | CELE_R173.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | cest-19 | ||||||||
| DB_info | Database | AceView | gene | XH650 | |||||
| WormQTL | gene | WBGene00020125 | |||||||
| WormFlux | gene | WBGene00020125 | |||||||
| NDB | locus_tag | CELE_R173.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020125|UniProtKB=Q22008 | |||||||
| family | PTHR11559 | ||||||||
| NCBI | gene | 180973 | |||||||
| RefSeq | protein | NM_076786.7 | |||||||
| TrEMBL | UniProtAcc | Q22008 | |||||||
| UniProt_GCRP | UniProtAcc | Q22008 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 20 May 2019 14:10:26 | WBPerson1983 | Name_change | CGC_name | cest-19 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cest | ||||||||
| Allele (100) | |||||||||
| Strain | WBStrain00031060 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00073714 | ||||||||
| Ortholog (56) | |||||||||
| Paralog (41) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R173.3 | |||||||
| Corresponding_CDS_history | R173.3:wp133 | ||||||||
| R173.3:wp230 | |||||||||
| Corresponding_transcript | R173.3.1 | ||||||||
| Other_sequence | JI171194.1 | ||||||||
| JI224334.1 | |||||||||
| JI470172.1 | |||||||||
| SRC03077_1 | |||||||||
| BUC01116_1 | |||||||||
| JI168756.1 | |||||||||
| SR02578 | |||||||||
| FC815798.1 | |||||||||
| Associated_feature | WBsf1005712 | ||||||||
| WBsf1005713 | |||||||||
| WBsf1023173 | |||||||||
| WBsf1023174 | |||||||||
| WBsf237540 | |||||||||
| WBsf237541 | |||||||||
| WBsf237542 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00093038 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017889 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052008 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021769 | ||||||||
| Expr1155648 | |||||||||
| Expr2005670 | |||||||||
| Expr2023886 | |||||||||
| Drives_construct | WBCnstr00025359 | ||||||||
| Construct_product | WBCnstr00025359 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (129) | |||||||||
| Interaction | WBInteraction000215612 | ||||||||
| WBInteraction000253177 | |||||||||
| WBInteraction000253215 | |||||||||
| WBInteraction000292532 | |||||||||
| WBInteraction000362642 | |||||||||
| WBInteraction000445976 | |||||||||
| Map_info | Map | X | Position | -1.91093 | |||||
| Positive | Positive_clone | R173 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00055090 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
