WormBase Tree Display for Gene: WBGene00020212
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| WBGene00020212 | SMap | S_parent | Sequence | T04D1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | T04D1.2 | |||||||
| Molecular_name | T04D1.2 | ||||||||
| T04D1.2.1 | |||||||||
| CE18194 | |||||||||
| Other_name | CELE_T04D1.2 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | T04D1.2 | ||||||||
| DB_info | Database | AceView | gene | 1F245 | |||||
| WormQTL | gene | WBGene00020212 | |||||||
| WormFlux | gene | WBGene00020212 | |||||||
| NDB | locus_tag | CELE_T04D1.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020212|UniProtKB=O61844 | |||||||
| family | PTHR21503 | ||||||||
| NCBI | gene | 188058 | |||||||
| RefSeq | protein | NM_059024.2 | |||||||
| TREEFAM | TREEFAM_ID | TF315367 | |||||||
| TrEMBL | UniProtAcc | O61844 | |||||||
| UniProt_GCRP | UniProtAcc | O61844 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (33) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP1200 | ||||||||
| Ortholog (120) | |||||||||
| Paralog (63) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including ABalaaaarl; ABalaaaarr; ABalapppaa; ABalpapppa; and neurons based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including Psoralens; allantoin; and metformin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box associated and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T04D1.2 | |||||||
| Corresponding_transcript | T04D1.2.1 | ||||||||
| Associated_feature | WBsf643229 | ||||||||
| WBsf983465 | |||||||||
| WBsf983466 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052385 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035135 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004123 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011976 | ||||||||
| Expr1038795 | |||||||||
| Expr1156010 | |||||||||
| Expr2005817 | |||||||||
| Expr2024034 | |||||||||
| Drives_construct | WBCnstr00025295 | ||||||||
| Construct_product | WBCnstr00025295 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (83) | |||||||||
| Interaction | WBInteraction000346030 | ||||||||
| WBInteraction000442013 | |||||||||
| WBInteraction000450037 | |||||||||
| WBInteraction000455760 | |||||||||
| Map_info | Positive | Positive_clone | T04D1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -0.994055 | |||||||
| Reference | WBPaper00012854 | ||||||||
| Method | Gene |
