WormBase Tree Display for Gene: WBGene00020236

WBGene00020236 SMap: S_parent: Sequence: T05B4
  Identity: Version: 2
    Name: CGC_name: lgc-1 Paper_evidence: WBPaper00029376
          Person_evidence: WBPerson1430
      Sequence_name: T05B4.1
      Molecular_name: T05B4.1
        T05B4.1.1
        CE41156
      Other_name: CELE_T05B4.1 Accession_evidence: NDB BX284605
      Public_name: lgc-1
    DB_info: Database: AceView gene 5E615
        WormQTL gene WBGene00020236
        WormFlux gene WBGene00020236
        NDB locus_tag CELE_T05B4.1
        Panther gene CAEEL|WormBase=WBGene00020236|UniProtKB=O16426
          family PTHR18945
        NCBI gene 188099
        RefSeq protein NM_071753.7
        TREEFAM TREEFAM_ID TF319821
        TrEMBL UniProtAcc O16426
        UniProt_GCRP UniProtAcc O16426
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 18 May 2007 16:58:23 WBPerson2970 Name_change: CGC_name: lgc-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: lgc
    Allele (175)
    Strain: WBStrain00035020
      WBStrain00050946
    RNASeq_FPKM (74)
    GO_annotation (17)
    Ortholog (45)
    Paralog (100)
    Structured_description: Automated_description: Predicted to enable excitatory extracellular ligand-gated monoatomic ion channel activity and transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential. Predicted to be involved in excitatory postsynaptic potential and monoatomic ion transmembrane transport. Predicted to be located in neuron projection and synapse. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T05B4.1
    Corresponding_CDS_history: T05B4.1:wp105
      T05B4.1:wp176
      T05B4.1:wp253
      T05B4.1:wp265
    Corresponding_transcript: T05B4.1.1
    Other_sequence: Dviv_isotig15615
      Dviv_isotig15616
    Associated_feature: WBsf661208
      WBsf231639
  Experimental_info: RNAi_result: WBRNAi00052465 Inferred_automatically: RNAi_primary
      WBRNAi00018201 Inferred_automatically: RNAi_primary
      WBRNAi00035177 Inferred_automatically: RNAi_primary
      WBRNAi00102740 Inferred_automatically: RNAi_primary
      WBRNAi00066361 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013151
      Expr1038808
      Expr1156090
      Expr1200301
      Expr2013098
      Expr2031330
    Drives_construct: WBCnstr00025278
    Construct_product: WBCnstr00025278
    Microarray_results (17)
    Expression_cluster (92)
    Interaction (39)
  Map_info: Map: V Position: -6.41057 Error: 0.009922
    Positive: Positive_clone: T05B4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031295
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene