WormBase Tree Display for Gene: WBGene00020261
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| WBGene00020261 | SMap | S_parent | Sequence | T05E7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | vet-1 | Person_evidence | WBPerson481 | |||||
| WBPerson698 | |||||||||
| Sequence_name | T05E7.5 | ||||||||
| Molecular_name | T05E7.5 | ||||||||
| T05E7.5.1 | |||||||||
| CE51557 | |||||||||
| Other_name | CELE_T05E7.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | vet-1 | ||||||||
| DB_info | Database | AceView | gene | 1G778 | |||||
| WormQTL | gene | WBGene00020261 | |||||||
| WormFlux | gene | WBGene00020261 | |||||||
| NDB | locus_tag | CELE_T05E7.5 | |||||||
| NCBI | gene | 172308 | |||||||
| RefSeq | protein | NM_059386.8 | |||||||
| TrEMBL | UniProtAcc | O01861 | |||||||
| UniProt_GCRP | UniProtAcc | O01861 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 19 May 2010 11:39:27 | WBPerson2970 | Event | Acquires_merge | WBGene00006898 | ||||
| Name_change | CGC_name | vet-1 | |||||||
| Acquires_merge | WBGene00006898 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | vet | ||||||||
| Allele (13) | |||||||||
| Legacy_information | [C.elegansII] NMK. Abundant pre-gastrulation transcript. Encodes coiled-coil protein. [Schauer and Wood 1990; BW] | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrI_pilon.g1096 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Enriched in AWC; MC neuron; and hypodermis based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by eighteen chemicals including 1-methylnicotinamide; methylmercuric chloride; and rotenone based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T05E7.5 | |||||||
| Corresponding_CDS_history | T05E7.5:wp253 | ||||||||
| Corresponding_transcript | T05E7.5.1 | ||||||||
| Associated_feature | WBsf664327 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00001037 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052529 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012469 | ||||||||
| Expr1038820 | |||||||||
| Expr1156154 | |||||||||
| Expr2017970 | |||||||||
| Expr2036106 | |||||||||
| Drives_construct | WBCnstr00025258 | ||||||||
| Construct_product | WBCnstr00025258 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (176) | |||||||||
| Interaction (212) | |||||||||
| Map_info | Map | I | Position | 0.878389 | Error | 0.000333 | |||
| Positive | Positive_clone | T05E7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00002526 | ||||||||
| WBPaper00014776 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
