WormBase Tree Display for Gene: WBGene00020279
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| WBGene00020279 | SMap | S_parent | Sequence | T06A1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | glb-25 | Paper_evidence | WBPaper00031066 | |||||
| Person_evidence | WBPerson1540 | ||||||||
| Sequence_name | T06A1.4 | ||||||||
| Molecular_name | T06A1.4a | ||||||||
| T06A1.4a.1 | |||||||||
| CE40778 | |||||||||
| T06A1.4b | |||||||||
| CE50913 | |||||||||
| T06A1.4c | |||||||||
| CE50980 | |||||||||
| T06A1.4a.2 | |||||||||
| T06A1.4b.1 | |||||||||
| T06A1.4c.1 | |||||||||
| Other_name | CELE_T06A1.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | glb-25 | ||||||||
| DB_info | Database | AceView | gene | 5C423 | |||||
| WormQTL | gene | WBGene00020279 | |||||||
| WormFlux | gene | WBGene00020279 | |||||||
| NDB | locus_tag | CELE_T06A1.4 | |||||||
| Panther | gene | CAEEL|WormBase=T06A1.4c|UniProtKB=A0A0K3AV45 | |||||||
| family | PTHR46458 | ||||||||
| NCBI | gene | 188156 | |||||||
| RefSeq | protein | NM_001313256.3 | |||||||
| NM_001313257.3 | |||||||||
| NM_071134.6 | |||||||||
| TrEMBL | UniProtAcc | G5EGB6 | |||||||
| A0A0K3AV45 | |||||||||
| A0A0K3ASU6 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0K3AV45 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Feb 2007 11:07:42 | WBPerson1849 | Event | Acquires_merge | WBGene00020278 | ||||
| 3 | 22 Oct 2007 15:16:42 | WBPerson2970 | Name_change | CGC_name | glb-25 | ||||
| Acquires_merge | WBGene00020278 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | glb | ||||||||
| Allele (389) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00001108 | ||||||||
| 00001109 | |||||||||
| 00001110 | |||||||||
| 00001111 | |||||||||
| 00124948 | |||||||||
| 00124949 | |||||||||
| Ortholog (29) | |||||||||
| Paralog (15) | |||||||||
| Structured_description | Automated_description | Predicted to enable oxygen binding activity and oxygen carrier activity. Predicted to be involved in oxygen transport and response to hypoxia. Expressed in head neurons; lateral nerve cord; tail neurons; ventral cord neurons; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T06A1.4a | |||||||
| T06A1.4b | |||||||||
| T06A1.4c | |||||||||
| Corresponding_CDS_history | T06A1.4:wp172 | ||||||||
| Corresponding_transcript | T06A1.4a.1 | ||||||||
| T06A1.4a.2 | |||||||||
| T06A1.4b.1 | |||||||||
| T06A1.4c.1 | |||||||||
| Other_sequence (19) | |||||||||
| Associated_feature | WBsf718288 | ||||||||
| WBsf999424 | |||||||||
| WBsf1019240 | |||||||||
| WBsf231456 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00018265 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00009128 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052602 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00052601 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8505 | ||||||||
| Expr1013310 | |||||||||
| Expr1156211 | |||||||||
| Expr2012061 | |||||||||
| Expr2030297 | |||||||||
| Drives_construct | WBCnstr00013334 | ||||||||
| WBCnstr00025244 | |||||||||
| Construct_product | WBCnstr00025244 | ||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (99) | |||||||||
| Interaction | WBInteraction000198046 | ||||||||
| WBInteraction000252100 | |||||||||
| WBInteraction000262638 | |||||||||
| WBInteraction000270883 | |||||||||
| WBInteraction000348951 | |||||||||
| WBInteraction000361487 | |||||||||
| WBInteraction000406617 | |||||||||
| WBInteraction000407169 | |||||||||
| Map_info | Map | V | Position | -16.7274 | Error | 0.010735 | |||
| Positive | Positive_clone | T06A1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031066 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
