WormBase Tree Display for Gene: WBGene00020334
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| WBGene00020334 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | epg-7 | Paper_evidence | WBPaper00042170 | |||||
| Sequence_name | T08A9.1 | ||||||||
| Molecular_name | T08A9.1 | ||||||||
| T08A9.1.1 | |||||||||
| CE51575 | |||||||||
| Other_name | atg-11 | Person_evidence | WBPerson649 | ||||||
| CELE_T08A9.1 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | epg-7 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 29 Feb 2008 11:29:01 | WBPerson2970 | Name_change | CGC_name | atg-11 | ||||
| 3 | 05 Apr 2013 16:41:50 | WBPerson2970 | Name_change | Other_name | epg-7 | ||||
| 4 | 05 Jan 2016 15:12:26 | WBPerson2970 | Name_change | CGC_name | epg-7 | ||||
| Other_name | atg-11 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | epg | ||||||||
| Allele (101) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Ortholog (32) | |||||||||
| Structured_description | Automated_description | Enables molecular adaptor activity. Involved in positive regulation of macroautophagy. Located in cytoplasm. Expressed in neurons; pharyngeal muscle cell; and tail. Human ortholog(s) of this gene implicated in breast cancer. Is an ortholog of human RB1CC1 (RB1 inducible coiled-coil 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:1612 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15574) | ||||
| Molecular_info | Corresponding_CDS | T08A9.1 | |||||||
| Corresponding_CDS_history | T08A9.1:wp253 | ||||||||
| Corresponding_transcript | T08A9.1.1 | ||||||||
| Other_sequence | CRC02351_1 | ||||||||
| CR11895 | |||||||||
| CRC08490_1 | |||||||||
| CR08164 | |||||||||
| CJC14478_1 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00052820 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00092341 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092342 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018416 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr10810 | ||||||||
| Expr1022941 | |||||||||
| Expr1038858 | |||||||||
| Expr1156420 | |||||||||
| Expr2011346 | |||||||||
| Expr2029582 | |||||||||
| Drives_construct | WBCnstr00025211 | ||||||||
| Construct_product | WBCnstr00017142 | ||||||||
| WBCnstr00017143 | |||||||||
| WBCnstr00025211 | |||||||||
| Antibody | WBAntibody00002414 | ||||||||
| WBAntibody00002772 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (101) | |||||||||
| Interaction (24) | |||||||||
| Map_info | Map | X | Position | -1.7526 | Error | 0.000582 | |||
| Positive | Positive_clone | T08A9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
