WormBase Tree Display for Gene: WBGene00020363

WBGene00020363 SMap: S_parent: Sequence: T08E11
  Identity: Version: 2
    Name: CGC_name: fbxa-3 Person_evidence: WBPerson655
      Sequence_name: T08E11.7
      Molecular_name: T08E11.7
        T08E11.7.1
        CE39399
      Other_name: CELE_T08E11.7 Accession_evidence: NDB BX284602
      Public_name: fbxa-3
    DB_info: Database: AceView gene 2C106
        WormQTL gene WBGene00020363
        WormFlux gene WBGene00020363
        NDB locus_tag CELE_T08E11.7
        Panther gene CAEEL|WormBase=WBGene00020363|UniProtKB=O76638
          family PTHR23015
        NCBI gene 188289
        RefSeq protein NM_061683.4
        TREEFAM TREEFAM_ID TF322006
        TrEMBL UniProtAcc O76638
        UniProt_GCRP UniProtAcc O76638
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 12 Dec 2005 15:18:56 WBPerson2970 Name_change: CGC_name: fbxa-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (204)
    RNASeq_FPKM (74)
    Ortholog (40)
    Paralog (225)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in several structures, including ABalaaaarl; ABalaaaarr; MSpaapaa; coelomocyte; and neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including skn-1; glp-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by twelve chemicals including methylmercuric chloride; Sodium Chloride; and Rifampin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T08E11.7
    Corresponding_CDS_history: T08E11.7:wp151
    Corresponding_transcript: T08E11.7.1
    Associated_feature: WBsf649899
      WBsf649900
      WBsf655349
      WBsf986826
      WBsf1011639
  Experimental_info: RNAi_result: WBRNAi00052877 Inferred_automatically: RNAi_primary
      WBRNAi00103517 Inferred_automatically: RNAi_primary
      WBRNAi00018452 Inferred_automatically: RNAi_primary
      WBRNAi00103516 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013492
      Expr1156475
      Expr2011543
      Expr2029780
    Drives_construct: WBCnstr00025190
    Construct_product: WBCnstr00025190
    Microarray_results (15)
    Expression_cluster (158)
    Interaction: WBInteraction000190769
      WBInteraction000348909
  Map_info: Map: II Position: -14.3663 Error: 0.003655
    Positive: Positive_clone: T08E11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene