WormBase Tree Display for Gene: WBGene00020375
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| WBGene00020375 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pigv-1 | Person_evidence | WBPerson7529 | |||||
| Sequence_name | T09B4.1 | ||||||||
| Molecular_name | T09B4.1 | ||||||||
| T09B4.1.1 | |||||||||
| CE13457 | |||||||||
| Other_name | mal-3 | Person_evidence | WBPerson247 | ||||||
| CELE_T09B4.1 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | pigv-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 11 Nov 2013 09:38:46 | WBPerson2970 | Event | Acquires_merge | WBGene00003127 | ||||
| Name_change | CGC_name | pigv-1 | |||||||
| Other_name | mal-3 | ||||||||
| Acquires_merge | WBGene00003127 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pigv | ||||||||
| Allele (34) | |||||||||
| Legacy_information | [Hekimi S] Maternal-effect morphologically abnormal. head frequently deformed because buccal opening displaced ventrally, dorsally or laterally; some embryonic lethality, very high larval lethality; full zygotic and maternal rescue. NA1. [MQ] | ||||||||
| [C.elegansII] qm34 : head frequently deformed because buccal opening displaced ventrally, dorsally or laterally; some embryonic lethality, very high larval lethality; full zygotic and maternal rescue. NA1. [MQ] | |||||||||
| Strain | WBStrain00026656 | ||||||||
| WBStrain00049378 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Contained_in_operon | CEOP1308 | ||||||||
| Ortholog (35) | |||||||||
| Structured_description | Automated_description | Predicted to enable mannosyltransferase activity. Predicted to be involved in GPI anchor biosynthetic process. Predicted to be located in endoplasmic reticulum membrane. Predicted to be part of mannosyltransferase complex. Expressed in excretory cell; hypodermis; intestine; pharynx; and rectal epithelium. Human ortholog(s) of this gene implicated in hyperphosphatasia with impaired intellectual development syndrome 1. Is an ortholog of human PIGV (phosphatidylinositol glycan anchor biosynthesis class V). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0070433 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:26031) | ||||
| Molecular_info | Corresponding_CDS | T09B4.1 | |||||||
| Corresponding_transcript | T09B4.1.1 | ||||||||
| Other_sequence | CR01703 | ||||||||
| Oden_isotig20668 | |||||||||
| CRC00418_1 | |||||||||
| Associated_feature | WBsf643341 | ||||||||
| WBsf976718 | |||||||||
| WBsf976719 | |||||||||
| WBsf976720 | |||||||||
| WBsf983859 | |||||||||
| WBsf217765 | |||||||||
| WBsf217766 | |||||||||
| Experimental_info | RNAi_result (17) | ||||||||
| Expr_pattern | Expr12350 | ||||||||
| Expr1022823 | |||||||||
| Expr1038878 | |||||||||
| Expr1156530 | |||||||||
| Expr2014925 | |||||||||
| Expr2033160 | |||||||||
| Drives_construct | WBCnstr00020800 | ||||||||
| WBCnstr00025182 | |||||||||
| Construct_product | WBCnstr00020800 | ||||||||
| WBCnstr00025182 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (153) | |||||||||
| Interaction (268) | |||||||||
| Map_info | Positive | Positive_clone | T09B4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Mapping_data | 2_point | 7064 | |||||||
| Multi_point | 3410 | ||||||||
| 3411 | |||||||||
| Interpolated_map_position | I | 0.876894 | |||||||
| Reference | WBPaper00002340 | ||||||||
| WBPaper00021822 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00045573 | |||||||||
| WBPaper00046712 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064339 | |||||||||
| Method | Gene |
