WormBase Tree Display for Gene: WBGene00020383
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| WBGene00020383 | SMap | S_parent | Sequence | T09B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tin-44 | Paper_evidence | WBPaper00040589 | |||||
| Sequence_name | T09B4.9 | ||||||||
| Molecular_name | T09B4.9 | ||||||||
| T09B4.9.1 | |||||||||
| CE13473 | |||||||||
| Other_name | let-602 | Person_evidence | WBPerson533 | ||||||
| CELE_T09B4.9 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | tin-44 | ||||||||
| DB_info | Database | AceView | gene | 1G754 | |||||
| WormQTL | gene | WBGene00020383 | |||||||
| WormFlux | gene | WBGene00020383 | |||||||
| NDB | locus_tag | CELE_T09B4.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020383|UniProtKB=O02161 | |||||||
| family | PTHR10721 | ||||||||
| NCBI | gene | 172302 | |||||||
| RefSeq | protein | NM_059379.5 | |||||||
| SwissProt | UniProtAcc | O02161 | |||||||
| TREEFAM | TREEFAM_ID | TF106197 | |||||||
| UniProt_GCRP | UniProtAcc | O02161 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Feb 2015 12:17:30 | WBPerson2970 | Event | Acquires_merge | WBGene00002780 | ||||
| Name_change | CGC_name | tin-44 | |||||||
| Other_name | let-602 | ||||||||
| Acquires_merge | WBGene00002780 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tin | ||||||||
| Allele (29) | |||||||||
| Legacy_information | [McDowall JS] Early larval lethal | ||||||||
| [C.elegansII] h283 : early larval lethal. OA2: h374, h497. Cloned: mixed cosmid rescue, (incl. C46H8),partial rescue to sterile adult, no oocytes. [KR][McDowall JS] | |||||||||
| Strain | WBStrain00023750 | ||||||||
| WBStrain00036530 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Contained_in_operon | CEOP1304 | ||||||||
| Ortholog (35) | |||||||||
| Structured_description | Automated_description | Predicted to enable protein-folding chaperone binding activity. Predicted to be involved in protein import into mitochondrial matrix. Predicted to be located in mitochondrial inner membrane. Expressed in tail. Human ortholog(s) of this gene implicated in proliferative diabetic retinopathy. Is an ortholog of human TIMM44 (translocase of inner mitochondrial membrane 44). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:13207 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:17316) | ||||
| Molecular_info | Corresponding_CDS | T09B4.9 | |||||||
| Corresponding_transcript | T09B4.9.1 | ||||||||
| Other_sequence (39) | |||||||||
| Associated_feature | WBsf655274 | ||||||||
| WBsf219549 | |||||||||
| WBsf219550 | |||||||||
| WBsf219551 | |||||||||
| Experimental_info | RNAi_result (20) | ||||||||
| Expr_pattern | Chronogram1795 | ||||||||
| Expr6650 | |||||||||
| Expr1017079 | |||||||||
| Expr1038884 | |||||||||
| Expr1156539 | |||||||||
| Expr2017406 | |||||||||
| Expr2035545 | |||||||||
| Drives_construct | WBCnstr00003416 | ||||||||
| WBCnstr00025176 | |||||||||
| Construct_product | WBCnstr00025176 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (143) | |||||||||
| Interaction (81) | |||||||||
| Map_info | Positive | Positive_clone | C27D2 | ||||||
| C46H8 | |||||||||
| T09B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
| Negative | Negative_clone | C29F10 | |||||||
| C32G12 | |||||||||
| C40A4 | |||||||||
| C48E7 | |||||||||
| K04F10 | |||||||||
| Mapping_data | Pos_neg_data (16) | ||||||||
| Interpolated_map_position | I | 0.873656 | |||||||
| Reference | WBPaper00002829 | ||||||||
| WBPaper00002830 | |||||||||
| WBPaper00003985 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00040589 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061547 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | [McDowall JS] Extrachromosomal array containing three cosmids generated, then manipulated genetically. Rescuing cosmids deduced from experiments with other arrays. Rescuing array contained both positive clones. Partial rescue: normally early larval lethal, develops to sterile adult, no oocytes or eggs produced. | ||||||||
| Method | Gene |
