WormBase Tree Display for Gene: WBGene00020420
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| WBGene00020420 | SMap | S_parent | Sequence | T10E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | npr-38 | Person_evidence | WBPerson19776 | |||||
| Sequence_name | T10E10.3 | ||||||||
| Molecular_name | T10E10.3a | ||||||||
| T10E10.3a.1 | |||||||||
| CE53603 | |||||||||
| T10E10.3b | |||||||||
| CE53542 | |||||||||
| T10E10.3c | |||||||||
| CE53492 | |||||||||
| T10E10.3b.1 | |||||||||
| T10E10.3c.1 | |||||||||
| Other_name | T10E10.c | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_T10E10.3 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | npr-38 | ||||||||
| DB_info | Database | AceView | gene | XG935 | |||||
| WormQTL | gene | WBGene00020420 | |||||||
| WormFlux | gene | WBGene00020420 | |||||||
| NDB | locus_tag | CELE_T10E10.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020420|UniProtKB=Q22377 | |||||||
| family | PTHR46895 | ||||||||
| NCBI | gene | 188386 | |||||||
| RefSeq | protein | NM_001375046.1 | |||||||
| NM_001375048.2 | |||||||||
| NM_001375047.3 | |||||||||
| TrEMBL | UniProtAcc | A0A5E4LZB1 | |||||||
| A0A5E4LWY0 | |||||||||
| A0A5E4LWL2 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A5E4LZB1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 16 Feb 2022 12:47:28 | WBPerson51134 | Name_change | CGC_name | npr-38 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npr | ||||||||
| Allele (27) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004033 | ||||||||
| 00125048 | |||||||||
| 00125049 | |||||||||
| 00125050 | |||||||||
| 00125051 | |||||||||
| Ortholog (22) | |||||||||
| Paralog (187) | |||||||||
| Structured_description | Automated_description | Predicted to enable G protein-coupled peptide receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T10E10.3a | |||||||
| T10E10.3b | |||||||||
| T10E10.3c | |||||||||
| Corresponding_CDS_history | T10E10.3:wp109 | ||||||||
| T10E10.3:wp272 | |||||||||
| Corresponding_transcript | T10E10.3a.1 | ||||||||
| T10E10.3b.1 | |||||||||
| T10E10.3c.1 | |||||||||
| Associated_feature | WBsf1005548 | ||||||||
| WBsf1005549 | |||||||||
| WBsf1005550 | |||||||||
| WBsf1005551 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00053049 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018550 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035440 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025416 | ||||||||
| Expr1156653 | |||||||||
| Expr2006077 | |||||||||
| Expr2024291 | |||||||||
| Drives_construct | WBCnstr00025155 | ||||||||
| Construct_product | WBCnstr00025155 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (43) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Map | X | Position | -3.12138 | |||||
| Positive | Positive_clone | T10E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00065686 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
