WormBase Tree Display for Gene: WBGene00020427
expand all nodes | collapse all nodes | view schema
| WBGene00020427 | SMap | S_parent | Sequence | T10H10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sav-1 | Person_evidence | WBPerson1636 | |||||
| Sequence_name | T10H10.3 | ||||||||
| Molecular_name | T10H10.3 | ||||||||
| T10H10.3.1 | |||||||||
| CE39400 | |||||||||
| Other_name | CELE_T10H10.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | sav-1 | ||||||||
| DB_info | Database | AceView | gene | XC902 | |||||
| WormQTL | gene | WBGene00020427 | |||||||
| WormFlux | gene | WBGene00020427 | |||||||
| NDB | locus_tag | CELE_T10H10.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020427|UniProtKB=P91441 | |||||||
| family | PTHR47522 | ||||||||
| NCBI | gene | 188402 | |||||||
| RefSeq | protein | NM_076017.8 | |||||||
| TREEFAM | TREEFAM_ID | TF317631 | |||||||
| TrEMBL | UniProtAcc | P91441 | |||||||
| UniProt_GCRP | UniProtAcc | P91441 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 13 Jul 2009 13:51:47 | WBPerson9133 | Name_change | CGC_name | sav-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sav | ||||||||
| Allele (45) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00051050 | ||||||||
| 00051051 | |||||||||
| 00051052 | |||||||||
| 00051053 | |||||||||
| 00051054 | |||||||||
| 00125061 | |||||||||
| 00125062 | |||||||||
| 00125063 | |||||||||
| 00125064 | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00010444 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to enable molecular adaptor activity. Predicted to be involved in hippo signaling; negative regulation of cell population proliferation; and positive regulation of apoptotic process. Predicted to be located in cytosol. Is an ortholog of human SAV1 (salvador family WW domain containing protein 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T10H10.3 | |||||||
| Corresponding_CDS_history | T10H10.3:wp151 | ||||||||
| Corresponding_transcript | T10H10.3.1 | ||||||||
| Other_sequence | CSC01689_1 | ||||||||
| FD515629.1 | |||||||||
| Oden_isotig19040 | |||||||||
| Acan_isotig13936 | |||||||||
| JI168765.1 | |||||||||
| Tcir_isotig23116 | |||||||||
| Oden_isotig25987 | |||||||||
| Dviv_isotig22958 | |||||||||
| Associated_feature | WBsf670174 | ||||||||
| WBsf670175 | |||||||||
| WBsf1004283 | |||||||||
| WBsf1004284 | |||||||||
| WBsf1022440 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00075889 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018562 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053072 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026708 | ||||||||
| Expr1038910 | |||||||||
| Expr1156681 | |||||||||
| Expr2015605 | |||||||||
| Expr2033840 | |||||||||
| Drives_construct | WBCnstr00025148 | ||||||||
| Construct_product | WBCnstr00025148 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (65) | |||||||||
| Interaction | WBInteraction000033717 | ||||||||
| WBInteraction000033721 | |||||||||
| WBInteraction000233341 | |||||||||
| WBInteraction000318377 | |||||||||
| WBInteraction000350025 | |||||||||
| WBInteraction000470045 | |||||||||
| Map_info | Map | X | Position | -15.8845 | |||||
| Positive | Positive_clone | T10H10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
