WormBase Tree Display for Gene: WBGene00020439
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| WBGene00020439 | SMap | S_parent | Sequence | T12A2 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | Sequence_name | T12A2.5 | ||||||||
| Molecular_name | T12A2.5 | |||||||||
| Other_name | CELE_T12A2.5 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | T12A2.5 | |||||||||
| DB_info | Database | AceView | gene | 3H324 | ||||||
| WormQTL | gene | WBGene00020439 | ||||||||
| WormFlux | gene | WBGene00020439 | ||||||||
| NDB | locus_tag | CELE_T12A2.5 | ||||||||
| NCBI | gene | 54162247 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 20 Jan 2020 12:20:01 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| 3 | 20 Jan 2020 14:57:33 | WBPerson4025 | Event | Split_into | WBGene00305999 | |||||
| Split_into | WBGene00305999 | |||||||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (41) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00037100 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| Inparanoid_8 | ||||||||||
| WBGene00055414 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Paralog | WBGene00020441 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00020440 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Panther | ||||||||||
| Structured_description | Automated_description | Enriched in germ line; neurons; and in male based on proteomic and RNA-seq studies. Is affected by several genes including rrf-3; eat-2; and pgl-1 based on tiling array and RNA-seq studies. Is affected by eight chemicals including tryptophan; 1-methylnicotinamide; and Zidovudine based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | T12A2.5:wp275 | ||||||||
| Corresponding_pseudogene | T12A2.5 | |||||||||
| Associated_feature | WBsf666979 | |||||||||
| WBsf992690 | ||||||||||
| WBsf1015054 | ||||||||||
| Experimental_info | Expr_pattern | Expr1022031 | ||||||||
| Expr1038915 | ||||||||||
| Expr1156754 | ||||||||||
| Expr2006118 | ||||||||||
| Expr2024332 | ||||||||||
| Drives_construct | WBCnstr00025140 | |||||||||
| Construct_product | WBCnstr00025140 | |||||||||
| Expression_cluster (44) | ||||||||||
| Interaction (51) | ||||||||||
| Map_info | Positive | Positive_clone | T12A2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | III | -1.40804 | ||||||||
| Method | Gene |
