WormBase Tree Display for Gene: WBGene00020452
expand all nodes | collapse all nodes | view schema
| WBGene00020452 | SMap | S_parent | Sequence | T12B5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-22 | Person_evidence | WBPerson655 | |||||
| Sequence_name | T12B5.5 | ||||||||
| Molecular_name | T12B5.5 | ||||||||
| T12B5.5.1 | |||||||||
| CE32722 | |||||||||
| Other_name | CELE_T12B5.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | fbxa-22 | ||||||||
| DB_info | Database | AceView | gene | 3B555 | |||||
| WormQTL | gene | WBGene00020452 | |||||||
| WormFlux | gene | WBGene00020452 | |||||||
| NDB | locus_tag | CELE_T12B5.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020452|UniProtKB=Q9TZ28 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 188444 | |||||||
| RefSeq | protein | NM_064897.2 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | Q9TZ28 | |||||||
| UniProt_GCRP | UniProtAcc | Q9TZ28 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-22 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (69) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (14) | |||||||||
| Paralog (219) | |||||||||
| Structured_description | Automated_description | Is affected by hpl-2 and rsr-2 based on tiling array studies. Is affected by tetrabromobisphenol A based on microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T12B5.5 | |||||||
| Corresponding_CDS_history | T12B5.5:wp90 | ||||||||
| Corresponding_transcript | T12B5.5.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00053189 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00006608 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018633 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019830 | ||||||||
| Expr1156781 | |||||||||
| Expr2029768 | |||||||||
| Drives_construct | WBCnstr00025128 | ||||||||
| Construct_product | WBCnstr00025128 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (14) | |||||||||
| Interaction (129) | |||||||||
| Map_info | Map | III | Position | -25.0796 | Error | 0.002885 | |||
| Positive | Positive_clone | T12B5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
