WormBase Tree Display for Gene: WBGene00020465

WBGene00020465 SMap: S_parent: Sequence: CHROMOSOME_IV
  Identity: Version: 1
    Name: Sequence_name: T12E12.6
      Molecular_name: T12E12.6
        T12E12.6.1
        CE37272
      Other_name: CELE_T12E12.6 Accession_evidence: NDB BX284604
      Public_name: T12E12.6
    DB_info: Database: AceView gene 4G330
        WormQTL gene WBGene00020465
        WormFlux gene WBGene00020465
        NDB locus_tag CELE_T12E12.6
        Panther gene CAEEL|WormBase=WBGene00020465|UniProtKB=A5A631
          family PTHR11533
        NCBI gene 188454
        RefSeq protein NM_068430.4
        TREEFAM TREEFAM_ID TF315550
        TrEMBL UniProtAcc A5A631
        UniProt_GCRP UniProtAcc A5A631
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (87)
    Strain: WBStrain00033281
    RNASeq_FPKM (74)
    GO_annotation (18)
    Ortholog (28)
    Paralog (13)
    Structured_description: Automated_description: Predicted to enable metalloaminopeptidase activity; peptide binding activity; and zinc ion binding activity. Involved in embryo development; regulation of egg-laying behavior; and regulation of meiotic cell cycle process involved in oocyte maturation. Predicted to be located in cytoplasm. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T12E12.6
    Corresponding_CDS_history: T12E12.6:wp129
    Corresponding_transcript: T12E12.6.1
    Other_sequence: Dviv_isotig12151
      Dviv_isotig12149
    Associated_feature: WBsf651805
      WBsf230096
  Experimental_info: RNAi_result: WBRNAi00053218 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022002
      Expr1156804
      Expr2006134
      Expr2024349
    Drives_construct: WBCnstr00025118
    Construct_product: WBCnstr00025118
    Microarray_results (20)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00040221:DAF-12_target_ALF4
      WBPaper00040560:hpl-2_L3_upregulated
      WBPaper00042215:wdr-23(tm1817)_upregulated
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00044260:1-methylnicotinamide_upregulated
      WBPaper00044260:nicotinc-acid_upregulated
      WBPaper00044736:oscillating_dev_expression
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045316:prg-1_upregulated_L4
      WBPaper00045390:tunicamycin_upregulated
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00045774:clk-1_downregulated
      WBPaper00045934:wrn-1(gk99)_upregulated
      WBPaper00048690:gonad-hermaphrodite-biased
      WBPaper00048988:daf-2(e1370)_downregulated_neuron
      WBPaper00048988:neuron_expressed
      WBPaper00049498:npr-1(ur89)_regulated_1
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00050488:20C_vs_25C_regulated_mir-34(OverExpression)_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
      WBPaper00050488:mir-34(OverExpression)_vs_N2_regulated_adult_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00051404:alg-1(gk214)_downregulated
      WBPaper00051404:alg-2(ok304)_downregulated
      WBPaper00053020:sid-3(ok973)_upregulated
      WBPaper00053388:dauer_regulated_Cluster5
      WBPaper00053771:down_by_skn-1(RNAi)_at_24h-NaCl
      WBPaper00053771:down_by_skn-1(RNAi)_at_dpy-7(e88)
      WBPaper00054410:set-9(rw5)_downregulated
      WBPaper00054410:set-26(tm2467)_downregulated
      WBPaper00054493:hpl-2(tm1489)_upregulated
      WBPaper00055013:hmg-3(bar24)_downregulated
      WBPaper00055013:spt-16(RNAi)_downregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00055941:atfs-1(et15)_upregulated
      WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
      WBPaper00056169:rrf-3(pk1426)_downregulated_L4
      WBPaper00056169:rrf-3(pk1426)_upregulated_L1
      WBPaper00056290:hsp-6(mg585)_upregulated
      WBPaper00056330:glycine_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00056617:adr-1_upregulated_L4_transcript
      WBPaper00056617:adr-2_upregulated_L4_transcript
      WBPaper00057068:numr-1(RNAi)_downregulated
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058927:high-redox-state_upregulated
      WBPaper00058948:npr-8(ok1439)_downregulated_PA14
      WBPaper00058969:RIS_depleted
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00060014:set-2(tm1630)_downregulated
      WBPaper00060084:cco-1(RNAi)_downregulated_N2
      WBPaper00060434:pH4.33_vs_pH6.33_downrgulated
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00060909:atfs-1(et18)_downregulated
      WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061340:Anterior_arcade_cell
      WBPaper00061340:ant_arc_V
      WBPaper00061340:mc1
      WBPaper00061340:pm1_pm2
      WBPaper00061340:pm7
      WBPaper00061340:pm8
      WBPaper00061390:N2_ascarosides_downregulated
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061527:col-128-cdh-10_9234
      WBPaper00061653:alh-4(hj221)_downregulated
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00062056:lin-35(n745)_downregulated
      WBPaper00062156:jmjd-5(zr1234)_upregulated
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00062456:doxycycline_upregulated_N2_transcript
      WBPaper00062534:fat-P-80_downregulated
      WBPaper00062534:fat-P-80_downregulated_ech-6(RNAi)
      WBPaper00064532:pals-25(icb98)_downregulated
      WBPaper00064661:lpd-3(ok2138)_upregulated
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065086:JU1400_N.ferruginous_regulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
      WBPaper00065315:mating_upregulated_Day2-7
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065746:eat-2(ad1113)_downregulated
      WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
      WBPaper00065749:Heat-Shock_downregulated_N2
      WBPaper00065841:139_0
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00031832:slr-2_regulated
      WBPaper00032948:FedUp
      WBPaper00034739:N2lessDR1350
      WBPaper00034739:RIL17lessRIL14
      WBPaper00035588:alg-1(-)_upregulated
      WBPaper00036130:mir-243_up_regulated
      WBPaper00036286:Pattern_G
      WBPaper00038172:aak-2overexpression_down_regulated
      WBPaper00038172:tax-6null_down_regulated
      WBPaper00040116:pRJ-FR.5_down_regulated
      WBPaper00040210:Chlorpyrifos_16C_regulated
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00046548:dafachronic-acid_upregulated
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00056330:mrps-5(RNAi)_upregulated
    Interaction (65)
  Map_info: Positive: Positive_clone: T12E12 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 1.89056
  Reference: WBPaper00055090
  Method: Gene