WormBase Tree Display for Gene: WBGene00020507
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| WBGene00020507 | SMap | S_parent | Sequence | T14F9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | vha-15 | |||||||
| Sequence_name | T14F9.1 | ||||||||
| Molecular_name | T14F9.1 | ||||||||
| T14F9.1.1 | |||||||||
| CE07497 | |||||||||
| T14F9.1.2 | |||||||||
| Other_name | phi-52 | Person_evidence | WBPerson2582 | ||||||
| CELE_T14F9.1 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | vha-15 | ||||||||
| DB_info | Database | AceView | gene | XC857 | |||||
| WormQTL | gene | WBGene00020507 | |||||||
| WormFlux | gene | WBGene00020507 | |||||||
| NDB | locus_tag | CELE_T14F9.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020507|UniProtKB=Q22494 | |||||||
| family | PTHR10698 | ||||||||
| NCBI | gene | 180534 | |||||||
| RefSeq | protein | NM_076011.4 | |||||||
| SwissProt | UniProtAcc | Q22494 | |||||||
| TREEFAM | TREEFAM_ID | TF313488 | |||||||
| UniProt_GCRP | UniProtAcc | Q22494 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 05 Jul 2004 16:13:13 | WBPerson1971 | Name_change | CGC_name | vha-14 | ||||
| 3 | 17 Mar 2005 13:54:35 | WBPerson2970 | Name_change | Other_name | phi-52 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | vha | ||||||||
| Allele (29) | |||||||||
| Strain | WBStrain00003023 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00075389 | ||||||||
| 00075390 | |||||||||
| 00125134 | |||||||||
| 00125135 | |||||||||
| 00125136 | |||||||||
| Ortholog (37) | |||||||||
| Paralog | WBGene00018698 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | vha-15 encodes an ortholog of subunit H of the cytoplasmic (V1) domainof vacuolar proton-translocating ATPase (V-ATPase); VHA-15 and VHA-18are co-orthologs; VHA-15, along with VHA-2 and probably all V-ATPasesubunits, is required for systemic RNAi, probably during endocytoticRNAi uptake; VHA-15 is a predicted cytosolic stator (stalk) component;neurons). | Paper_evidence | WBPaper00006525 | |||||
| WBPaper00026649 | |||||||||
| WBPaper00027766 | |||||||||
| WBPaper00028773 | |||||||||
| WBPaper00028774 | |||||||||
| WBPaper00028775 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 20 Nov 2006 00:00:00 | ||||||||
| Automated_description | Predicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in proton transmembrane transport. Predicted to be part of vacuolar proton-transporting V-type ATPase, V1 domain. Is an ortholog of human ATP6V1H (ATPase H+ transporting V1 subunit H). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T14F9.1 | |||||||
| Corresponding_transcript | T14F9.1.1 | ||||||||
| T14F9.1.2 | |||||||||
| Other_sequence (177) | |||||||||
| Associated_feature | WBsf647849 | ||||||||
| WBsf982128 | |||||||||
| WBsf1004273 | |||||||||
| WBsf235379 | |||||||||
| WBsf235380 | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Chronogram1289 | ||||||||
| Expr6694 | |||||||||
| Expr1012449 | |||||||||
| Expr1038940 | |||||||||
| Expr1156911 | |||||||||
| Expr2017981 | |||||||||
| Expr2036117 | |||||||||
| Drives_construct | WBCnstr00003523 | ||||||||
| WBCnstr00025088 | |||||||||
| Construct_product | WBCnstr00025088 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (176) | |||||||||
| Interaction (48) | |||||||||
| Map_info | Map | X | Position | -16.0111 | |||||
| Positive | Positive_clone | T14F9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
