WormBase Tree Display for Gene: WBGene00020572
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| WBGene00020572 | SMap | S_parent | Sequence | T19D7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rund-1 | Paper_evidence | WBPaper00045066 | |||||
| Person_evidence | WBPerson298 | ||||||||
| Sequence_name | T19D7.4 | ||||||||
| Molecular_name | T19D7.4 | ||||||||
| T19D7.4.1 | |||||||||
| CE49927 | |||||||||
| Other_name | CELE_T19D7.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | rund-1 | ||||||||
| DB_info | Database | AceView | gene | XB278 | |||||
| WormQTL | gene | WBGene00020572 | |||||||
| WormFlux | gene | WBGene00020572 | |||||||
| NDB | locus_tag | CELE_T19D7.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020572|UniProtKB=Q22585 | |||||||
| family | PTHR22957 | ||||||||
| NCBI | gene | 180416 | |||||||
| RefSeq | protein | NM_075735.8 | |||||||
| TREEFAM | TREEFAM_ID | TF105949 | |||||||
| TrEMBL | UniProtAcc | Q22585 | |||||||
| UniProt_GCRP | UniProtAcc | Q22585 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 24 Apr 2014 14:27:12 | WBPerson298 | Name_change | CGC_name | rund-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rund | ||||||||
| Allele (39) | |||||||||
| Strain | WBStrain00006714 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Ortholog (28) | |||||||||
| Paralog (16) | |||||||||
| Structured_description | Automated_description | Enables small GTPase binding activity. Involved in several processes, including dense core granule maturation; positive regulation of behavior; and regulation of transport. Located in several cellular components, including Golgi trans cisterna; neuronal cell body; and perinuclear region of cytoplasm. Expressed in uterus. Is an ortholog of human RUNDC1 (RUN domain containing 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T19D7.4 | |||||||
| Corresponding_CDS_history | T19D7.4:wp243 | ||||||||
| Corresponding_transcript | T19D7.4.1 | ||||||||
| Other_sequence (29) | |||||||||
| Associated_feature | WBsf1003831 | ||||||||
| WBsf1003832 | |||||||||
| WBsf1022154 | |||||||||
| WBsf1022155 | |||||||||
| WBsf236947 | |||||||||
| WBsf236948 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00053545 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00018856 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035672 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram181 | ||||||||
| Expr6715 | |||||||||
| Expr11740 | |||||||||
| Expr11742 | |||||||||
| Expr1026689 | |||||||||
| Expr1157111 | |||||||||
| Expr2015573 | |||||||||
| Expr2033808 | |||||||||
| Drives_construct (17) | |||||||||
| Construct_product | WBCnstr00019179 | ||||||||
| WBCnstr00019180 | |||||||||
| WBCnstr00019193 | |||||||||
| WBCnstr00019194 | |||||||||
| WBCnstr00019196 | |||||||||
| WBCnstr00025042 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (138) | |||||||||
| Interaction (18) | |||||||||
| Map_info | Map | X | Position | -19.5165 | |||||
| Positive | Positive_clone | T19D7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00045066 | |||||||||
| WBPaper00048038 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061444 | |||||||||
| WBPaper00063151 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
