WormBase Tree Display for Gene: WBGene00020675
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| WBGene00020675 | SMap | S_parent | Sequence | T22B11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | spe-51 | Person_evidence | WBPerson48368 | |||||
| Sequence_name | T22B11.1 | ||||||||
| Molecular_name | T22B11.1 | ||||||||
| T22B11.1.1 | |||||||||
| CE47623 | |||||||||
| Other_name | CELE_T22B11.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | spe-51 | ||||||||
| DB_info | Database | AceView | gene | 4F457 | |||||
| WormQTL | gene | WBGene00020675 | |||||||
| WormFlux | gene | WBGene00020675 | |||||||
| NDB | locus_tag | CELE_T22B11.1 | |||||||
| NCBI | gene | 188725 | |||||||
| RefSeq | protein | NM_068215.5 | |||||||
| TREEFAM | TREEFAM_ID | TF354200 | |||||||
| TrEMBL | UniProtAcc | O44564 | |||||||
| UniProt_GCRP | UniProtAcc | O44564 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Jan 2023 20:48:33 | WBPerson51134 | Name_change | CGC_name | spe-51 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | spe | ||||||||
| Allele (62) | |||||||||
| Strain | WBStrain00051684 | ||||||||
| WBStrain00051682 | |||||||||
| WBStrain00054633 | |||||||||
| WBStrain00054634 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00017700 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Structured_description | Automated_description | Enriched in AIN; MC neuron; somatic gonad precursor; and in male based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and eat-2 based on tiling array; RNA-seq; and microarray studies. Is affected by seven chemicals including manganese chloride; Psoralens; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T22B11.1 | |||||||
| Corresponding_CDS_history | T22B11.1:wp122 | ||||||||
| T22B11.1:wp231 | |||||||||
| Corresponding_transcript | T22B11.1.1 | ||||||||
| Other_sequence | CBC14433_1 | ||||||||
| Dviv_isotig34334 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00053777 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00035781 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018994 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024668 | ||||||||
| Expr1157328 | |||||||||
| Expr2006339 | |||||||||
| Expr2024559 | |||||||||
| Drives_construct | WBCnstr00024968 | ||||||||
| Construct_product | WBCnstr00024968 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (90) | |||||||||
| Interaction (43) | |||||||||
| Map_info | Map | IV | Position | 0.68133 | |||||
| Positive | Positive_clone | T22B11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00057849 | ||||||||
| WBPaper00064898 | |||||||||
| WBPaper00065660 | |||||||||
| WBPaper00065755 | |||||||||
| WBPaper00065756 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
