WormBase Tree Display for Gene: WBGene00020691

WBGene00020691 SMap: S_parent: Sequence: T22E5
  Identity: Version: 2
    Name: CGC_name: igdb-3 Person_evidence: WBPerson260
      Sequence_name: T22E5.3
      Molecular_name: T22E5.3
        T22E5.3.1
        CE37152
      Other_name: CELE_T22E5.3 Accession_evidence: NDB BX284606
      Public_name: igdb-3
    DB_info: Database: AceView gene XH5
        WormQTL gene WBGene00020691
        WormFlux gene WBGene00020691
        NDB locus_tag CELE_T22E5.3
        Panther gene CAEEL|WormBase=WBGene00020691|UniProtKB=Q22681
          family PTHR13817
        NCBI gene 188745
        RefSeq protein NM_076673.4
        TREEFAM TREEFAM_ID TF315410
        TrEMBL UniProtAcc Q22681
        UniProt_GCRP UniProtAcc Q22681
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 02 Mar 2012 16:42:47 WBPerson2970 Name_change: CGC_name: igdb-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: igdb
    Allele (51)
    RNASeq_FPKM (74)
    Ortholog (22)
    Paralog: WBGene00007736 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00011418 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Automated_description: Enriched in several structures, including ABarpaapap; ABarpaappa; ABarpaappp; male distal tip cell; and somatic gonad precursor based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by fourteen chemicals including 1-methylnicotinamide; methylmercuric chloride; and multi-walled carbon nanotube based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Fibronectin type III superfamily; Domain of unknown function DB; Fibronectin type III; Immunoglobulin-like fold; Immunoglobulin-like domain superfamily; Fibronectin type III domain; and DB module. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T22E5.3
    Corresponding_CDS_history: T22E5.3:wp128
    Corresponding_transcript: T22E5.3.1
    Associated_feature: WBsf648229
      WBsf648230
      WBsf662880
      WBsf1005562
      WBsf1023092
  Experimental_info: RNAi_result: WBRNAi00053835 Inferred_automatically: RNAi_primary
      WBRNAi00019028 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1017751
      Expr1039012
      Expr1157385
      Expr2012708
      Expr2030944
    Drives_construct: WBCnstr00024957
    Construct_product: WBCnstr00024957
    Microarray_results (19)
    Expression_cluster (120)
    Interaction: WBInteraction000198462
  Map_info: Map: X Position: -2.92279
    Positive: Positive_clone: T22E5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene