WormBase Tree Display for Gene: WBGene00020872
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| WBGene00020872 | SMap | S_parent | Sequence | T28A11 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | T28A11.5 | ||||||||
| Molecular_name | T28A11.5 | |||||||||
| Other_name | CELE_T28A11.5 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | T28A11.5 | |||||||||
| DB_info | Database | AceView | gene | 5D745 | ||||||
| WormQTL | gene | WBGene00020872 | ||||||||
| WormFlux | gene | WBGene00020872 | ||||||||
| NDB | locus_tag | CELE_T28A11.5 | ||||||||
| NCBI | gene | 189012 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 02 Dec 2015 10:17:45 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (31) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00163153 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| TreeFam | ||||||||||
| WBGene00053176 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00121631 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| Paralog (33) | ||||||||||
| Structured_description | Automated_description | Enriched in GABAergic neurons; body wall muscle cell; and ventral nerve cord based on tiling array and RNA-seq studies. Is affected by several genes including npr-1; lin-35; and dcr-1 based on microarray and RNA-seq studies. Is affected by six chemicals including methylmercuric chloride; Mercuric Chloride; and paraquat based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | T28A11.5:wp251 | ||||||||
| Corresponding_pseudogene | T28A11.5 | |||||||||
| Experimental_info | Expr_pattern | Expr1157913 | ||||||||
| Microarray_results (13) | ||||||||||
| Expression_cluster (53) | ||||||||||
| Interaction | WBInteraction000184059 | |||||||||
| WBInteraction000280349 | ||||||||||
| WBInteraction000435527 | ||||||||||
| Map_info | Positive | Positive_clone | T28A11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | V | -12.4039 | ||||||||
| Method | Gene |
