WormBase Tree Display for Gene: WBGene00021132

WBGene00021132 SMap: S_parent: Sequence: W10D9
  Identity: Version: 2
    Name: CGC_name: nfyb-1 Paper_evidence: WBPaper00030771
          Person_evidence: WBPerson716
      Sequence_name: W10D9.4
      Molecular_name: W10D9.4a
        W10D9.4a.1
        CE14792
        W10D9.4b
        CE51090
        W10D9.4b.1
      Other_name: CELE_W10D9.4 Accession_evidence: NDB BX284602
      Public_name: nfyb-1
    DB_info: Database: AceView gene 2A752
        WormQTL gene WBGene00021132
        WormFlux gene WBGene00021132
        NDB locus_tag CELE_W10D9.4
        Panther gene CAEEL|WormBase=WBGene00021132|UniProtKB=O17286
          family PTHR11064
        NCBI gene 173435
        RefSeq protein NM_001316872.3
            NM_061339.7
        SwissProt UniProtAcc O17286
        UniProt_GCRP UniProtAcc O17286
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 16 Jul 2007 08:49:14 WBPerson2970 Name_change: CGC_name: nfyb-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nfyb
    Allele (106)
    Possibly_affected_by: WBVar02153247
    Strain: WBStrain00029952
      WBStrain00033864
    RNASeq_FPKM (74)
    GO_annotation (24)
    Contained_in_operon: CEOP2028
      CEOP2686
    Ortholog (26)
    Paralog: WBGene00001092 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enables DNA-binding transcription repressor activity. Involved in negative regulation of transcription by RNA polymerase II and tissue development. Located in cytoplasm and perikaryon. Expressed in several structures, including excretory cell; gonad; muscle cell; neurons; and oocyte. Is an ortholog of human NFYB (nuclear transcription factor Y subunit beta). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W10D9.4a
      W10D9.4b
    Corresponding_transcript: W10D9.4a.1
      W10D9.4b.1
    Other_sequence (11)
    Associated_feature: WBsf665324
      WBsf978558
      WBsf986411
      WBsf986412
      WBsf1011397
      WBsf222605
    Transcription_factor: WBTranscriptionFactor000418
      WBTranscriptionFactor001158
  Experimental_info: RNAi_result: WBRNAi00055089 Inferred_automatically: RNAi_primary
      WBRNAi00036431 Inferred_automatically: RNAi_primary
      WBRNAi00107390 Inferred_automatically: RNAi_primary
    Expr_pattern (13)
    Drives_construct: WBCnstr00012302
      WBCnstr00015285
      WBCnstr00043039
    Construct_product: WBCnstr00012302
    Regulate_expr_cluster: WBPaper00060006:nfyb-1(cu13)_downregulated_protein
      WBPaper00060006:nfyb-1(cu13)_downregulated_transcript
      WBPaper00060006:nfyb-1(cu13)_upregulated_protein
      WBPaper00060006:nfyb-1(cu13)_upregulated_transcript
    Microarray_results (19)
    Expression_cluster (94)
    Interaction (72)
  Map_info: Map: II Position: -15.6092 Error: 0.001075
    Positive: Positive_clone: W10D9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (13)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene