WormBase Tree Display for Gene: WBGene00021193
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| WBGene00021193 | SMap | S_parent | Sequence | Y16E11A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | math-44 | Person_evidence | WBPerson655 | |||||
| Sequence_name | Y16E11A.1 | ||||||||
| Molecular_name | Y16E11A.1 | ||||||||
| Y16E11A.1.1 | |||||||||
| CE53823 | |||||||||
| Other_name | CELE_Y16E11A.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | math-44 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 17:54:47 | WBPerson2970 | Name_change | CGC_name | math-44 | ||||
| 3 | 21 Nov 2019 15:13:57 | WBPerson4025 | Event | Split_into | WBGene00305158 | ||||
| Split_into | WBGene00305158 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | math | ||||||||
| Allele (83) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (18) | |||||||||
| Paralog (85) | |||||||||
| Structured_description | Automated_description | Enriched in AFD; Z1.p; Z4.a; gon_male_dtc anterior; and gon_male_dtc posterior based on RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and eat-2 based on microarray and RNA-seq studies. Is affected by eight chemicals including Alovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; and TRAF-like. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y16E11A.1 | |||||||
| Corresponding_CDS_history | Y16E11A.1:wp94 | ||||||||
| Y16E11A.1:wp274 | |||||||||
| Corresponding_transcript | Y16E11A.1.1 | ||||||||
| Associated_feature | WBsf986858 | ||||||||
| WBsf1011656 | |||||||||
| WBsf220895 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020069 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00036655 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055556 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011009 | ||||||||
| Expr1159057 | |||||||||
| Expr2013416 | |||||||||
| Expr2031650 | |||||||||
| Drives_construct | WBCnstr00024637 | ||||||||
| Construct_product | WBCnstr00024637 | ||||||||
| Microarray_results | SMD_Y16E11A_119.B | ||||||||
| 186476_at | |||||||||
| A_12_P104455 | |||||||||
| Aff_Y16E11A_119.B | |||||||||
| GPL19516_CGZ0043193 | |||||||||
| GPL21109_Y16E11A.1 | |||||||||
| GPL8304_CE_WBGene00021193_A | |||||||||
| GPL8304_CE_WBGene00021193_B | |||||||||
| GPL8673_Y16E11A_1P00595 | |||||||||
| Expression_cluster (86) | |||||||||
| SAGE_tag | SAGE:agcttcaactacaatac | Strand | Antisense | ||||||
| SAGE:gaatattgaa | Strand | Antisense | |||||||
| SAGE:gaatattgaagcgttct | Strand | Antisense | |||||||
| SAGE:agcttcaact | Strand | Antisense | |||||||
| Map_info | Map | II | Position | -14.0742 | Error | 0.004589 | |||
| Positive | Positive_clone | Y16E11A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
