WormBase Tree Display for Gene: WBGene00021198
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| WBGene00021198 | SMap | S_parent | Sequence | Y17G9B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | npp-26 | Paper_evidence | WBPaper00050419 | |||||
| Person_evidence | WBPerson1780 | ||||||||
| Sequence_name | Y17G9B.1 | ||||||||
| Molecular_name | Y17G9B.1 | ||||||||
| Y17G9B.1.1 | |||||||||
| CE34605 | |||||||||
| Other_name | CELE_Y17G9B.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | npp-26 | ||||||||
| DB_info | Database | AceView | gene | 4F531 | |||||
| WormQTL | gene | WBGene00021198 | |||||||
| WormFlux | gene | WBGene00021198 | |||||||
| NDB | locus_tag | CELE_Y17G9B.1 | |||||||
| NCBI | gene | 189466 | |||||||
| RefSeq | protein | NM_068238.4 | |||||||
| TREEFAM | TREEFAM_ID | TF316421 | |||||||
| TrEMBL | UniProtAcc | Q9N572 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N572 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 16 Feb 2017 15:37:28 | WBPerson2970 | Name_change | CGC_name | npp-26 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npp | ||||||||
| Allele (38) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP4634 | ||||||||
| Ortholog (23) | |||||||||
| Paralog | WBGene00013558 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaaaala; ABalaapaaa; AVA; NSM; and amphid neurons based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; hsf-1; and sir-2.1 based on tiling array; RNA-seq; and microarray studies. Is affected by eleven chemicals including 1-methylnicotinamide; methylmercuric chloride; and Psoralens based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y17G9B.1 | |||||||
| Corresponding_CDS_history | Y17G9B.1:wp102 | ||||||||
| Corresponding_transcript | Y17G9B.1.1 | ||||||||
| Other_sequence | EY470551.1 | ||||||||
| MJ02057 | |||||||||
| Associated_feature | WBsf996390 | ||||||||
| WBsf228236 | |||||||||
| WBsf228237 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00020097 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00091108 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00055596 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036682 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020415 | ||||||||
| Expr1039241 | |||||||||
| Expr1159102 | |||||||||
| Expr2014386 | |||||||||
| Expr2032627 | |||||||||
| Drives_construct | WBCnstr00024633 | ||||||||
| Construct_product | WBCnstr00024633 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (130) | |||||||||
| Interaction | WBInteraction000548722 | ||||||||
| Map_info | Map | IV | Position | 0.953893 | |||||
| Positive | Positive_clone | Y17G9B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00063941 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
