WormBase Tree Display for Gene: WBGene00021262
expand all nodes | collapse all nodes | view schema
| WBGene00021262 | SMap | S_parent | Sequence | Y22D7AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxa-74 | Person_evidence | WBPerson655 | |||||
| Sequence_name | Y22D7AR.9 | ||||||||
| Molecular_name | Y22D7AR.9 | ||||||||
| Y22D7AR.9.1 | |||||||||
| CE23413 | |||||||||
| Other_name | CELE_Y22D7AR.9 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | fbxa-74 | ||||||||
| DB_info | Database | AceView | gene | 3C780 | |||||
| WormQTL | gene | WBGene00021262 | |||||||
| WormFlux | gene | WBGene00021262 | |||||||
| NDB | locus_tag | CELE_Y22D7AR.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021262|UniProtKB=Q9BKX6 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 189515 | |||||||
| RefSeq | protein | NM_065045.7 | |||||||
| TREEFAM | TREEFAM_ID | TF322006 | |||||||
| TrEMBL | UniProtAcc | Q9BKX6 | |||||||
| UniProt_GCRP | UniProtAcc | Q9BKX6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-74 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele (83) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (27) | |||||||||
| Paralog (225) | |||||||||
| Structured_description | Automated_description | Enriched in head mesodermal cell and intestine based on tiling array and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; proteomic; tiling array; and RNA-seq studies. Is affected by sixteen chemicals including Mercuric Chloride; rotenone; and Zidovudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y22D7AR.9 | |||||||
| Corresponding_transcript | Y22D7AR.9.1 | ||||||||
| Other_sequence | MJ03339 | ||||||||
| EX561176.1 | |||||||||
| ACC12933_1 | |||||||||
| FG348059.1 | |||||||||
| Associated_feature | WBsf991358 | ||||||||
| WBsf1014280 | |||||||||
| WBsf1014281 | |||||||||
| WBsf226239 | |||||||||
| WBsf226240 | |||||||||
| WBsf226241 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055687 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020022 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021542 | ||||||||
| Expr1159212 | |||||||||
| Expr2029812 | |||||||||
| Microarray_results (11) | |||||||||
| Expression_cluster (189) | |||||||||
| Interaction | WBInteraction000549535 | ||||||||
| WBInteraction000549536 | |||||||||
| Map_info | Map | III | Position | -19.3015 | Error | 0.098881 | |||
| Positive | Positive_clone | Y22D7AR | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
