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WormBase Tree Display for Gene: WBGene00021461

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Name Class

WBGene00021461SMapS_parentSequenceY39G10AR
IdentityVersion3
NameCGC_namenekl-1Person_evidenceWBPerson353
Sequence_nameY39G10AR.3
Molecular_nameY39G10AR.3a
Y39G10AR.3a.1
CE49798
Y39G10AR.3b
CE49838
Y39G10AR.3b.1
Y39G10AR.3c
Y39G10AR.3d
Other_nameCELE_Y39G10AR.3Accession_evidenceNDBBX284601
Public_namenekl-1
DB_infoDatabase (14)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:31:04WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
229 Nov 2004 15:34:28WBPerson2970EventAcquires_mergeWBGene00021462
316 Feb 2007 14:39:36WBPerson2970Name_changeCGC_namenekl-1
Acquires_mergeWBGene00021462
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnekl
AlleleWBVar00092870Inferred_automaticallyFrom strain object: RB1455
WBVar01391542
WBVar00023751
WBVar02066319
WBVar02066320
WBVar00150357
WBVar01333062
WBVar00023756
WBVar00150358
WBVar00150359
WBVar02088582
WBVar00150362
WBVar02088583
WBVar02088584
WBVar00150367
WBVar00150372
WBVar00299333
WBVar01428821
WBVar00150373
WBVar00150374
WBVar00150375
WBVar00257452
WBVar00150376
WBVar00150377
WBVar02014066
WBVar00150378
WBVar01498793
WBVar02014067
WBVar02014068
WBVar00150379
WBVar00150380
WBVar02014069
WBVar01428932
WBVar00150381
WBVar00150382
WBVar00150386
WBVar00150387
WBVar00150389
WBVar00150390
WBVar00534655
WBVar02086027
WBVar00534662
WBVar02086028
WBVar00328222
WBVar00328223
WBVar00328224
WBVar02124308
WBVar00328225
WBVar01704638
WBVar01429043
WBVar00328226
WBVar01704639
WBVar00328227
WBVar01704640
WBVar01411577
WBVar01704641
WBVar00328228
WBVar01704642
WBVar00328229
WBVar00328230
WBVar01704643
WBVar01704644
WBVar00328231
WBVar01704645
WBVar00328232
WBVar00328233
WBVar01704646
WBVar01411588
WBVar00328234
WBVar01704647
WBVar00328235
WBVar00328236
WBVar02016164
WBVar00328237
WBVar02016165
WBVar00328238
WBVar02016166
WBVar02016167
WBVar01499559
WBVar01889767
WBVar00328239
WBVar01889768
WBVar00328240
WBVar01889769
WBVar00328241
WBVar01981978
WBVar01889770
WBVar00328242
WBVar01681396
WBVar01889771
WBVar01681397
WBVar00328243
WBVar01411600
WBVar00328244
WBVar02124144
WBVar00328245
WBVar00328246
WBVar00328247
WBVar00328248
WBVar01943084
WBVar00619379
WBVar02098935
WBVar00296864
WBVar01411611
WBVar00619380
WBVar00619381
WBVar00619382
WBVar01411622
WBVar00619383
WBVar00619384
WBVar02011839
WBVar00619385
WBVar02011840
WBVar00619386
WBVar00619387
WBVar01411633
WBVar00619388
WBVar00619389
WBVar00619390
WBVar00619391
WBVar01429154
WBVar00619392
WBVar02068060
WBVar00619393
WBVar02068061
WBVar00619394
WBVar00619395
WBVar00302935
WBVar00619396
WBVar00619397
WBVar00619398
WBVar00619399
WBVar00619400
WBVar00619401
WBVar00619402
WBVar01411655
WBVar00619403
WBVar00619404
WBVar00619405
WBVar00619406
WBVar02006243
WBVar00619407
WBVar00619408
WBVar01430590
WBVar00619409
WBVar01411666
WBVar01556343
WBVar00619410
WBVar01430591
WBVar01332617
WBVar01430592
WBVar00619411
WBVar01998795
WBVar00619412
WBVar01499786
WBVar01430593
WBVar00619413
WBVar00250891
WBVar01430594
WBVar01430595
WBVar00619414
WBVar01332650
WBVar00619415
WBVar01832187
WBVar01411677
WBVar00619416
WBVar00619417
WBVar02070505
WBVar00619418
WBVar02070506
WBVar00619419
WBVar00619420
WBVar01662273
WBVar01332683
WBVar02126578
WBVar01662274
WBVar02126579
WBVar00619421
WBVar01992985
WBVar00619422
WBVar01662275
WBVar01332717
WBVar00619423
WBVar01332728
WBVar00619424
WBVar00619425
WBVar00619426
WBVar00619427
WBVar01499985
WBVar02101743
WBVar00619428
WBVar02101744
WBVar02124749
WBVar02124382
WBVar00619429
WBVar00619430
WBVar01332750
WBVar01332761
WBVar00619431
WBVar00619432
WBVar00619433
WBVar01782707
WBVar00619434
WBVar00619435
WBVar00619436
WBVar01332772
WBVar00619437
WBVar01640531
WBVar00619438
WBVar01640532
WBVar01640533
WBVar00619439
WBVar01640534
WBVar00619440
WBVar00619441
WBVar01640535
WBVar00619442
WBVar00619443
WBVar02096608
WBVar00619444
WBVar00619445
WBVar02096609
WBVar01332794
WBVar02121086
WBVar01931544
WBVar00619446
WBVar02096610
WBVar01931545
WBVar01931548
WBVar00619447
WBVar00619448
WBVar01931550
WBVar00619449
WBVar01931551
WBVar00619450
WBVar01931553
WBVar01712489
WBVar01931554
WBVar01622621
WBVar01531403
WBVar00619451
WBVar01712490
WBVar01931555
WBVar01531404
WBVar00619452
WBVar01712491
WBVar01622622
WBVar01931556
WBVar01332807
WBVar01531405
WBVar01712492
WBVar00619453
WBVar01931557
WBVar01531406
WBVar00619454
WBVar01531407
WBVar01474988
WBVar00619455
WBVar01474989
WBVar01531408
WBVar00619456
WBVar00023661
WBVar01531409
WBVar00619457
WBVar01332818
WBVar01474990
WBVar00619458
WBVar01531410
WBVar01474991
WBVar00619459
WBVar01474992
WBVar01573752
WBVar02075027
WBVar01531411
WBVar00023666
WBVar01474993
WBVar01531412
WBVar00619460
WBVar01573753
WBVar01429265
WBVar01474994
WBVar01531413
WBVar01573754
WBVar00619461
WBVar02072215
WBVar00619462
WBVar00023671
WBVar01474995
WBVar01531414
WBVar01573755
WBVar00619463
WBVar01474996
WBVar01531415
WBVar01573756
WBVar01573757
WBVar01531416
WBVar00619464
WBVar01474997
WBVar01531417
WBVar01573758
WBVar00023676
WBVar00619465
WBVar01474998
WBVar01474999
WBVar01531418
WBVar01573759
WBVar00619466
WBVar01531419
WBVar01475000
WBVar00619467
WBVar01573760
WBVar01531420
WBVar00023681
WBVar01475001
WBVar00619468
WBVar00619469
WBVar01475002
WBVar02116693
WBVar01531421
WBVar01475003
WBVar01531422
WBVar02116694
WBVar00023686
WBVar01475004
WBVar01947929
WBVar01531423
WBVar00235743
WBVar01531424
WBVar00235744
WBVar01531425
WBVar00023691
WBVar01531426
WBVar01531427
WBVar01531428
WBVar02009687
WBVar00023696
WBVar02120568
WBVar00023701
WBVar02120569
WBVar01956275
WBVar00023706
WBVar01956276
WBVar01956277
WBVar00023711
WBVar01411210
WBVar02122416
WBVar02035139
WBVar01545883
WBVar01545884
WBVar01332951
WBVar01332973
WBVar00023716
WBVar01398762
WBVar00023721
WBVar00097043
WBVar00097044
WBVar01279315
WBVar02102546
WBVar00097045
WBVar01279316
WBVar00023726
WBVar00097046
WBVar00097047
WBVar01332984
WBVar00097048
WBVar00023731
WBVar00097049
WBVar00097050
WBVar02083783
WBVar02083784
WBVar00097051
WBVar00023736
WBVar02083785
WBVar02093537
WBVar02083786
WBVar02093538
WBVar02083787
WBVar02083788
WBVar01655136
WBVar00023741
WBVar01655137
WBVar01655138
WBVar01402847
WBVar00023746
WBVar01429376
WBVar01391541
WBVar01497490
StrainWBStrain00032153
WBStrain00052052
WBStrain00052053
RNASeq_FPKM (74)
GO_annotation (12)
Ortholog (37)
ParalogWBGene00017033Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00017578Caenorhabditis elegansFrom_analysisPanther
WBGene00022631Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00008956Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013694Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00020324Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable protein serine/threonine kinase activity. Predicted to be involved in phosphorylation. Predicted to be located in nucleus. Expressed in amphid neurons and lumbar neurons. Human ortholog(s) of this gene implicated in lethal congenital contracture syndrome; nephronophthisis 9; and renal-hepatic-pancreatic dysplasia. Is an ortholog of human NEK9 (NIMA related kinase 9).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0060558Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:18591)
DOID:0111120Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:13387)
DOID:0060259Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:13387)
Molecular_infoCorresponding_CDSY39G10AR.3a
Y39G10AR.3b
Corresponding_CDS_historyY39G10AR.3:wp124
Y39G10AR.3:wp127
Y39G10AR.3:wp243
Corresponding_transcriptY39G10AR.3c
Y39G10AR.3d
Y39G10AR.3a.1
Y39G10AR.3b.1
Other_sequence (12)
Associated_feature (14)
Experimental_infoRNAi_resultWBRNAi00004597Inferred_automaticallyRNAi_primary
WBRNAi00056276Inferred_automaticallyRNAi_primary
WBRNAi00056277Inferred_automaticallyRNAi_primary
Expr_patternExpr12765
Expr1025642
Expr1039376
Expr1159759
Expr2013952
Expr2032191
Drives_constructWBCnstr00022797
Microarray_results (28)
Expression_cluster (132)
Map_infoMapIPosition-8.92543Error0.029913
PositivePositive_cloneY39G10ARInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00027258
WBPaper00031387
WBPaper00038491
WBPaper00049300
WBPaper00055090
WBPaper00061306
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene