WormBase Tree Display for Gene: WBGene00021504
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| WBGene00021504 | SMap | S_parent | Sequence | Y41D4A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y41D4A.1 | |||||||
| Molecular_name | Y41D4A.1 | ||||||||
| Y41D4A.1.1 | |||||||||
| CE39046 | |||||||||
| Other_name | CELE_Y41D4A.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y41D4A.1 | ||||||||
| DB_info | Database | AceView | gene | 4C539 | |||||
| WormQTL | gene | WBGene00021504 | |||||||
| WormFlux | gene | WBGene00021504 | |||||||
| NDB | locus_tag | CELE_Y41D4A.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021504|UniProtKB=Q95Y21 | |||||||
| family | PTHR34150 | ||||||||
| NCBI | gene | 176986 | |||||||
| RefSeq | protein | NM_067733.6 | |||||||
| TREEFAM | TREEFAM_ID | TF315341 | |||||||
| TrEMBL | UniProtAcc | Q95Y21 | |||||||
| UniProt_GCRP | UniProtAcc | Q95Y21 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (48) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00004156 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00008073 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010573 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00018492 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00019839 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00020421 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00044016 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022445 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00235273 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in pharyngeal gland cell and in male based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including elt-2; pmk-1; and clk-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including methylmercuric chloride; allantoin; and metformin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Cysteine-rich repeat. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y41D4A.1 | |||||||
| Corresponding_CDS_history | Y41D4A.1:wp147 | ||||||||
| Corresponding_transcript | Y41D4A.1.1 | ||||||||
| Other_sequence | ASC09861_1 | ||||||||
| Dviv_isotig29185 | |||||||||
| PPC03452_1 | |||||||||
| JO475314.1 | |||||||||
| Acan_isotig12218 | |||||||||
| JI178816.1 | |||||||||
| PPC11766_1 | |||||||||
| DV019524.1 | |||||||||
| FC809851.1 | |||||||||
| Associated_feature | WBsf645819 | ||||||||
| WBsf995526 | |||||||||
| WBsf995527 | |||||||||
| WBsf995528 | |||||||||
| WBsf1016782 | |||||||||
| WBsf227977 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056368 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1015225 | ||||||||
| Expr1159855 | |||||||||
| Expr2007435 | |||||||||
| Expr2025671 | |||||||||
| Drives_construct | WBCnstr00024520 | ||||||||
| Construct_product | WBCnstr00024520 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (82) | |||||||||
| Map_info | Positive | Positive_clone | Y41D4A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -16.0181 | |||||||
| Method | Gene |
