WormBase Tree Display for Gene: WBGene00021518
expand all nodes | collapse all nodes | view schema
| WBGene00021518 | SMap | S_parent | Sequence | Y41D4B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | hpo-6 | Paper_evidence | WBPaper00038231 | |||||
| Person_evidence | WBPerson26 | ||||||||
| Sequence_name | Y41D4B.16 | ||||||||
| Molecular_name | Y41D4B.16 | ||||||||
| Y41D4B.16.1 | |||||||||
| CE21859 | |||||||||
| Other_name | CELE_Y41D4B.16 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | hpo-6 | ||||||||
| DB_info | Database | AceView | gene | 4C327 | |||||
| WormQTL | gene | WBGene00021518 | |||||||
| WormFlux | gene | WBGene00021518 | |||||||
| NDB | locus_tag | CELE_Y41D4B.16 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021518|UniProtKB=Q95Y17 | |||||||
| family | PTHR21733 | ||||||||
| NCBI | gene | 176965 | |||||||
| RefSeq | protein | NM_067699.4 | |||||||
| TREEFAM | TREEFAM_ID | TF315857 | |||||||
| TrEMBL | UniProtAcc | Q95Y17 | |||||||
| UniProt_GCRP | UniProtAcc | Q95Y17 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 26 Apr 2011 13:31:47 | WBPerson2970 | Name_change | CGC_name | hpo-6 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hpo | ||||||||
| Allele (52) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00089550 | ||||||||
| Ortholog (17) | |||||||||
| Paralog (21) | |||||||||
| Structured_description | Automated_description | Located in membrane raft. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y41D4B.16 | |||||||
| Corresponding_transcript | Y41D4B.16.1 | ||||||||
| Other_sequence | FD516601.1 | ||||||||
| CSC02372_1 | |||||||||
| Associated_feature | WBsf645801 | ||||||||
| WBsf227955 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00089363 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00088693 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00088586 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020494 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00095231 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010447 | ||||||||
| Expr1039407 | |||||||||
| Expr1159870 | |||||||||
| Expr2012583 | |||||||||
| Expr2030819 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (330) | |||||||||
| Interaction | WBInteraction000549513 | ||||||||
| WBInteraction000549514 | |||||||||
| WBInteraction000549521 | |||||||||
| WBInteraction000549528 | |||||||||
| WBInteraction000549530 | |||||||||
| WBInteraction000549540 | |||||||||
| WBInteraction000549541 | |||||||||
| Map_info | Map | IV | Position | -17.7149 | Error | 0.234859 | |||
| Positive | Positive_clone | Y41D4B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00028789 | ||||||||
| WBPaper00037777 | |||||||||
| WBPaper00058665 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
