WormBase Tree Display for Gene: WBGene00021581
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WBGene00021581 | SMap | S_parent | Sequence | Y46C8AL | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | clec-70 | Person_evidence | WBPerson261 | |||||
WBPerson655 | |||||||||
Sequence_name | Y46C8AL.3 | ||||||||
Molecular_name | Y46C8AL.3 | ||||||||
Y46C8AL.3.1 | |||||||||
CE40158 | |||||||||
Other_name | Y46C8AL.d | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_Y46C8AL.3 | Accession_evidence | NDB | BX284604 | ||||||
Public_name | clec-70 | ||||||||
DB_info | Database | AceView | gene | 4E697 | |||||
WormQTL | gene | WBGene00021581 | |||||||
WormFlux | gene | WBGene00021581 | |||||||
NDB | locus_tag | CELE_Y46C8AL.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00021581|UniProtKB=Q9N3X0 | |||||||
family | PTHR23062 | ||||||||
NCBI | gene | 189944 | |||||||
RefSeq | protein | NM_068038.4 | |||||||
TREEFAM | TREEFAM_ID | TF317818 | |||||||
TrEMBL | UniProtAcc | Q9N3X0 | |||||||
UniProt_GCRP | UniProtAcc | Q9N3X0 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 28 Sep 2005 17:40:12 | WBPerson2970 | Name_change | CGC_name | clec-70 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | clec | ||||||||
Allele (84) | |||||||||
Strain | WBStrain00032356 | ||||||||
WBStrain00037631 | |||||||||
WBStrain00004710 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00094062 | ||||||||
Ortholog (20) | |||||||||
Paralog (45) | |||||||||
Structured_description | Automated_description | Involved in defense response to Gram-positive bacterium. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y46C8AL.3 | |||||||
Corresponding_CDS_history | Y46C8AL.3:wp156 | ||||||||
Corresponding_transcript | Y46C8AL.3.1 | ||||||||
Associated_feature | WBsf996123 | ||||||||
WBsf1017153 | |||||||||
Experimental_info | RNAi_result | WBRNAi00037120 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00056646 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1020200 | ||||||||
Expr1160118 | |||||||||
Drives_construct | WBCnstr00024496 | ||||||||
Construct_product | WBCnstr00024496 | ||||||||
Microarray_results (14) | |||||||||
Expression_cluster (217) | |||||||||
Interaction | WBInteraction000541051 | ||||||||
WBInteraction000541054 | |||||||||
WBInteraction000542471 | |||||||||
WBInteraction000542587 | |||||||||
Map_info | Map | IV | Position | -1.56832 | Error | 0.015894 | |||
Positive | Positive_clone | Y46C8AL | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (6) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |