WormBase Tree Display for Gene: WBGene00021599
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| WBGene00021599 | SMap | S_parent | Sequence | Y46H3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | srt-42 | Person_evidence | WBPerson655 | |||||
| Sequence_name | Y46H3A.1 | ||||||||
| Molecular_name | Y46H3A.1a | ||||||||
| Y46H3A.1a.1 | |||||||||
| CE50896 | |||||||||
| Y46H3A.1b | |||||||||
| CE51007 | |||||||||
| Y46H3A.1b.1 | |||||||||
| Other_name | CELE_Y46H3A.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | srt-42 | ||||||||
| DB_info | Database | AceView | gene | 5C285 | |||||
| WormQTL | gene | WBGene00021599 | |||||||
| WormFlux | gene | WBGene00021599 | |||||||
| NDB | locus_tag | CELE_Y46H3A.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021599|UniProtKB=H2KZZ8 | |||||||
| family | PTHR23021 | ||||||||
| NCBI | gene | 189961 | |||||||
| RefSeq | protein | NM_001029074.6 | |||||||
| NM_001029073.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF315399 | |||||||
| TrEMBL | UniProtAcc | H2KZZ8 | |||||||
| Q9N4W8 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZZ8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Dec 2004 09:41:19 | WBPerson2970 | Name_change | CGC_name | srt-42 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | srt | ||||||||
| Allele (32) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022695 | ||||||||
| Ortholog (71) | |||||||||
| Paralog (69) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y46H3A.1a | |||||||
| Y46H3A.1b | |||||||||
| Corresponding_CDS_history | Y46H3A.1:wp109 | ||||||||
| Y46H3A.1:wp137 | |||||||||
| Y46H3A.1a:wp249 | |||||||||
| Y46H3A.1b:wp240 | |||||||||
| Y46H3A.1b:wp249 | |||||||||
| Corresponding_transcript | Y46H3A.1a.1 | ||||||||
| Y46H3A.1b.1 | |||||||||
| Other_sequence | Acan_isotig16343 | ||||||||
| DVC00467_1 | |||||||||
| EV850058.1 | |||||||||
| Associated_feature | WBsf661149 | ||||||||
| WBsf999395 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00056698 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00037144 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020182 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017129 | ||||||||
| Expr1160168 | |||||||||
| Expr2016670 | |||||||||
| Expr2034857 | |||||||||
| Drives_construct | WBCnstr00024490 | ||||||||
| Construct_product | WBCnstr00024490 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (77) | |||||||||
| Interaction | WBInteraction000032191 | ||||||||
| Map_info | Map | V | Position | -17.2454 | Error | 0.084053 | |||
| Positive | Positive_clone | Y46H3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
