WormBase Tree Display for Gene: WBGene00021611
expand all nodes | collapse all nodes | view schema
| WBGene00021611 | SMap | S_parent | Sequence | Y46H3D | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-238 | Person_evidence | WBPerson600 | |||||
| Sequence_name | Y46H3D.7 | ||||||||
| Molecular_name | Y46H3D.7a | ||||||||
| Y46H3D.7a.1 | |||||||||
| CE24324 | |||||||||
| Y46H3D.7b | |||||||||
| Other_name | CELE_Y46H3D.7 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-238 | ||||||||
| DB_info | Database | AceView | gene | 5C106 | |||||
| WormQTL | gene | WBGene00021611 | |||||||
| WormFlux | gene | WBGene00021611 | |||||||
| NDB | locus_tag | CELE_Y46H3D.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021611|UniProtKB=Q966B7 | |||||||
| family | PTHR46011 | ||||||||
| NCBI | gene | 189971 | |||||||
| RefSeq | protein | NR_132512.1 | |||||||
| NM_071060.5 | |||||||||
| TrEMBL | UniProtAcc | Q966B7 | |||||||
| UniProt_GCRP | UniProtAcc | Q966B7 | |||||||
| RNAcentral | URSid | URS000083929C | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-238 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (37) | |||||||||
| Strain | WBStrain00036823 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (29) | |||||||||
| Paralog (217) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y46H3D.7a | |||||||
| Corresponding_transcript | Y46H3D.7b | ||||||||
| Y46H3D.7a.1 | |||||||||
| Associated_feature | WBsf652475 | ||||||||
| WBsf233348 | |||||||||
| Transcription_factor | WBTranscriptionFactor000927 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00056721 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1018440 | ||||||||
| Expr1039454 | |||||||||
| Expr1160190 | |||||||||
| Expr2014137 | |||||||||
| Expr2032377 | |||||||||
| Drives_construct | WBCnstr00024482 | ||||||||
| Construct_product | WBCnstr00024482 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (116) | |||||||||
| Map_info | Map | V | Position | -17.8309 | Error | 0.004694 | |||
| Positive | Positive_clone | Y46H3D | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
