WormBase Tree Display for Gene: WBGene00021740
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| WBGene00021740 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | Y50D4B.1 | |||||||
| Molecular_name (12) | |||||||||
| Other_name | Y50D4B.f | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y50D4B.1 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y50D4B.1 | ||||||||
| DB_info | Database | AceView | gene | 5B587 | |||||
| WormQTL | gene | WBGene00021740 | |||||||
| WormFlux | gene | WBGene00021740 | |||||||
| NDB | locus_tag | CELE_Y50D4B.1 | |||||||
| NCBI | gene | 190093 | |||||||
| RefSeq | protein | NM_001377585.2 | |||||||
| NM_001313336.3 | |||||||||
| NM_001313073.4 | |||||||||
| NM_001313074.4 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3ARN9 | |||||||
| A0A0K3AV71 | |||||||||
| A0A0K3AT27 | |||||||||
| O16286 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0K3ARN9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 09 Oct 2014 17:31:54 | WBPerson4025 | Event | Acquires_merge | WBGene00021071 | ||||
| Acquires_merge | WBGene00021071 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (338) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (28) | |||||||||
| Structured_description | Automated_description | Enriched in neurons and retrovesicular ganglion based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and let-7 based on microarray; tiling array; RNA-seq; and proteomic studies. Is affected by eleven chemicals including Tunicamycin; stavudine; and Zidovudine based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y50D4B.1a | |||||||
| Y50D4B.1b | |||||||||
| Y50D4B.1c | |||||||||
| Y50D4B.1d | |||||||||
| Corresponding_CDS_history | Y50D4B.1:wp154 | ||||||||
| Y50D4B.1:wp245 | |||||||||
| Corresponding_transcript | Y50D4B.1a.1 | ||||||||
| Y50D4B.1b.1 | |||||||||
| Y50D4B.1c.1 | |||||||||
| Y50D4B.1d.1 | |||||||||
| Other_sequence (16) | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00054941 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00020825 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057070 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000941 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036359 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019694 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019693 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013990 | ||||||||
| Expr1015981 | |||||||||
| Expr1039191 | |||||||||
| Expr1158476 | |||||||||
| Expr1160517 | |||||||||
| Expr2007744 | |||||||||
| Expr2025987 | |||||||||
| Drives_construct | WBCnstr00024696 | ||||||||
| Construct_product | WBCnstr00024696 | ||||||||
| Microarray_results (39) | |||||||||
| Expression_cluster (174) | |||||||||
| Interaction | WBInteraction000506970 | ||||||||
| WBInteraction000553080 | |||||||||
| Map_info | Positive | Positive_clone | Y50D4B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -19.8526 | |||||||
| Reference | WBPaper00061970 | ||||||||
| Method | Gene |
