WormBase Tree Display for Gene: WBGene00021743
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| WBGene00021743 | SMap | S_parent | Sequence | Y50D4B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | Y50D4B.4 | |||||||
| Molecular_name (18) | |||||||||
| Other_name | Y50D4B.d | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y50D4B.4 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y50D4B.4 | ||||||||
| DB_info | Database | AceView | gene | 5B575 | |||||
| WormQTL | gene | WBGene00021743 | |||||||
| WormFlux | gene | WBGene00021743 | |||||||
| NDB | locus_tag | CELE_Y50D4B.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021743|UniProtKB=A0A0K3ASH9 | |||||||
| family | PTHR12143 | ||||||||
| NCBI | gene | 3565176 | |||||||
| RefSeq | protein | NM_001313339.3 | |||||||
| NM_001313342.3 | |||||||||
| NM_001313343.3 | |||||||||
| NM_001313340.3 | |||||||||
| NM_001313338.3 | |||||||||
| NM_001313341.3 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3AT32 | |||||||
| A0A0K3AYC5 | |||||||||
| A0A0K3ASH9 | |||||||||
| A0A0K3ASI0 | |||||||||
| A0A0K3AVD4 | |||||||||
| A0A0K3AW37 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A0K3ASH9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 23 Jul 2015 12:40:33 | WBPerson4025 | Event | Acquires_merge | WBGene00021742 | ||||
| Acquires_merge | WBGene00021742 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (188) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00001032 | ||||||||
| 00001033 | |||||||||
| 00001034 | |||||||||
| 00001035 | |||||||||
| 00001036 | |||||||||
| 00001037 | |||||||||
| 00125974 | |||||||||
| 00125975 | |||||||||
| Ortholog (12) | |||||||||
| Paralog (19) | |||||||||
| Structured_description | Automated_description | Predicted to enable peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity. Predicted to be involved in glycoprotein catabolic process and protein quality control for misfolded or incompletely synthesized proteins. Predicted to be located in cytosol and nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y50D4B.4a | |||||||
| Y50D4B.4b | |||||||||
| Y50D4B.4c | |||||||||
| Y50D4B.4d | |||||||||
| Y50D4B.4e | |||||||||
| Y50D4B.4f | |||||||||
| Corresponding_CDS_history | Y50D4B.4:wp110 | ||||||||
| Y50D4B.4:wp249 | |||||||||
| Corresponding_transcript | Y50D4B.4a.1 | ||||||||
| Y50D4B.4b.1 | |||||||||
| Y50D4B.4c.1 | |||||||||
| Y50D4B.4d.1 | |||||||||
| Y50D4B.4e.1 | |||||||||
| Y50D4B.4f.1 | |||||||||
| Associated_feature | WBsf999251 | ||||||||
| WBsf999252 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057072 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057073 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1018314 | ||||||||
| Expr1160519 | |||||||||
| Expr1160520 | |||||||||
| Expr2007746 | |||||||||
| Expr2025989 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (238) | |||||||||
| Interaction | WBInteraction000551792 | ||||||||
| WBInteraction000578192 | |||||||||
| Map_info | Positive | Positive_clone | Y50D4B | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -19.8533 | |||||||
| Reference | WBPaper00065331 | ||||||||
| Method | Gene |
