WormBase Tree Display for Gene: WBGene00021771
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| WBGene00021771 | Evidence | Paper_evidence | WBPaper00049297 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y51F10 | ||||||
| Identity | Version | 2 | |||||||
| Name | CGC_name | spe-48 | Paper_evidence | WBPaper00049297 | |||||
| Person_evidence | WBPerson602 | ||||||||
| Sequence_name | Y51F10.10 | ||||||||
| Molecular_name (15) | |||||||||
| Other_name | CELE_Y51F10.10 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | spe-48 | ||||||||
| DB_info | Database | AceView | gene | 1C422 | |||||
| WormQTL | gene | WBGene00021771 | |||||||
| WormFlux | gene | WBGene00021771 | |||||||
| NDB | locus_tag | CELE_Y51F10.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021771|UniProtKB=Q8WTK0 | |||||||
| family | PTHR15960 | ||||||||
| NCBI | gene | 245997 | |||||||
| RefSeq | protein | NM_001306472.3 | |||||||
| NM_170811.6 | |||||||||
| NM_001306471.3 | |||||||||
| NM_001306469.2 | |||||||||
| NM_001306470.3 | |||||||||
| TrEMBL | UniProtAcc | X5MBH3 | |||||||
| X5MD76 | |||||||||
| Q8WTK0 | |||||||||
| X5M5Q2 | |||||||||
| X5MK34 | |||||||||
| UniProt_GCRP | UniProtAcc | Q8WTK0 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 16 Mar 2016 10:11:38 | WBPerson2970 | Name_change | CGC_name | spe-48 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | spe | ||||||||
| Allele (290) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00085383 | ||||||||
| 00085384 | |||||||||
| 00085385 | |||||||||
| 00126006 | |||||||||
| 00126007 | |||||||||
| 00126008 | |||||||||
| Ortholog (24) | |||||||||
| Structured_description | Automated_description | Predicted to enable ubiquitin binding activity. Predicted to be involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway. Predicted to be part of ESCRT I complex. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y51F10.10a | |||||||
| Y51F10.10b | |||||||||
| Y51F10.10c | |||||||||
| Y51F10.10d | |||||||||
| Y51F10.10e | |||||||||
| Corresponding_transcript | Y51F10.10a.1 | ||||||||
| Y51F10.10b.1 | |||||||||
| Y51F10.10c.1 | |||||||||
| Y51F10.10d.1 | |||||||||
| Y51F10.10e.1 | |||||||||
| Other_sequence (11) | |||||||||
| Associated_feature | WBsf648952 | ||||||||
| WBsf663934 | |||||||||
| WBsf980951 | |||||||||
| WBsf982777 | |||||||||
| WBsf982778 | |||||||||
| WBsf1009268 | |||||||||
| WBsf1009269 | |||||||||
| WBsf218999 | |||||||||
| WBsf219000 | |||||||||
| WBsf219001 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057154 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1011651 | ||||||||
| Expr1039548 | |||||||||
| Expr1160597 | |||||||||
| Expr2016046 | |||||||||
| Expr2034281 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (63) | |||||||||
| Map_info | Map | I | Position | -12.4109 | |||||
| Positive | Positive_clone | Y51F10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00001075 | ||||||||
| WBPaper00052148 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
