WormBase Tree Display for Gene: WBGene00021792
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| WBGene00021792 | SMap | S_parent | Sequence | Y52D5A | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | Y52D5A.1 | ||||||||
| Molecular_name | Y52D5A.1 | |||||||||
| Other_name | CELE_Y52D5A.1 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | Y52D5A.1 | |||||||||
| DB_info | Database | AceView | gene | 4G229 | ||||||
| WormQTL | gene | WBGene00021792 | ||||||||
| WormFlux | gene | WBGene00021792 | ||||||||
| NDB | locus_tag | CELE_Y52D5A.1 | ||||||||
| NCBI | gene | 190184 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 17 Oct 2013 17:45:16 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (17) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Contained_in_operon | CEOP4164 | |||||||||
| Ortholog | WBGene00039745 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00149397 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00061561 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Paralog | WBGene00008272 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00015305 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00021010 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00050919 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| WBGene00022288 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
| Structured_description | Automated_description | Enriched in body wall muscle cell and hypodermis based on tiling array studies. Is affected by several genes including daf-2; eat-2; and npr-1 based on tiling array; RNA-seq; and microarray studies. Is affected by five chemicals including methylmercuric chloride; Tunicamycin; and Doxycycline based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | Y52D5A.1:wp225 | ||||||||
| Y52D5A.1:wp240 | ||||||||||
| Corresponding_pseudogene | Y52D5A.1 | |||||||||
| Experimental_info | Expr_pattern | Expr1160667 | ||||||||
| Microarray_results | SMD_Y52D5A.B | |||||||||
| 185759_at | ||||||||||
| A_12_P118256 | ||||||||||
| Aff_Y52D5A_42.A | ||||||||||
| GPL8304_CE_WBGene00021792_B | ||||||||||
| GPL8673_Y52D5A_1P02309 | ||||||||||
| GPL8673_Y52D5A_1P02618 | ||||||||||
| Expression_cluster (78) | ||||||||||
| Map_info | Positive | Positive_clone | Y52D5A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | IV | 1.68631 | ||||||||
| Method | Gene |
