WormBase Tree Display for Gene: WBGene00021831
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| WBGene00021831 | SMap | S_parent | Sequence | Y54E10A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | Y54E10A.11 | |||||||
| Molecular_name | Y54E10A.11 | ||||||||
| Y54E10A.11.1 | |||||||||
| CE37436 | |||||||||
| Y54E10A.11.2 | |||||||||
| Other_name | CELE_Y54E10A.11 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | Y54E10A.11 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 29 Nov 2004 11:39:27 | WBPerson2970 | Event | Acquires_merge | WBGene00021836 | ||||
| Acquires_merge | WBGene00021836 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (437) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Contained_in_operon | CEOP1916 | ||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00019014 | Caenorhabditis elegans | From_analysis | Panther | |||||
| Structured_description | Automated_description | Predicted to enable ribosomal large subunit binding activity and ubiquitin protein ligase activity. Predicted to be involved in rescue of stalled ribosome and ribosome-associated ubiquitin-dependent protein catabolic process. Predicted to be located in cytosol. Predicted to be part of RQC complex. Is an ortholog of human LTN1 (listerin E3 ubiquitin protein ligase 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54E10A.11 | |||||||
| Corresponding_CDS_history | Y54E10A.11:wp124 | ||||||||
| Y54E10A.11:wp130 | |||||||||
| Corresponding_transcript | Y54E10A.11.1 | ||||||||
| Y54E10A.11.2 | |||||||||
| Other_sequence (28) | |||||||||
| Associated_feature | WBsf649012 | ||||||||
| WBsf664018 | |||||||||
| WBsf664019 | |||||||||
| WBsf983080 | |||||||||
| WBsf983081 | |||||||||
| WBsf983082 | |||||||||
| WBsf1009464 | |||||||||
| WBsf1009465 | |||||||||
| WBsf1009466 | |||||||||
| WBsf219107 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057339 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057346 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027632 | ||||||||
| Expr1039578 | |||||||||
| Expr1160776 | |||||||||
| Expr2007886 | |||||||||
| Expr2026127 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (88) | |||||||||
| Interaction | WBInteraction000564998 | ||||||||
| WBInteraction000565280 | |||||||||
| WBInteraction000575510 | |||||||||
| WBInteraction000581231 | |||||||||
| WBInteraction000586501 | |||||||||
| Map_info | Positive | Positive_clone | Y54E10A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -4.47338 | |||||||
| Reference | WBPaper00027315 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
