WormBase Tree Display for Gene: WBGene00021857
expand all nodes | collapse all nodes | view schema
| WBGene00021857 | SMap | S_parent | Sequence | Y54F10BM | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | iffb-1 | Person_evidence | WBPerson398 | |||||
| Sequence_name | Y54F10BM.2 | ||||||||
| Molecular_name | Y54F10BM.2 | ||||||||
| Y54F10BM.2.1 | |||||||||
| CE42600 | |||||||||
| Other_name | CELE_Y54F10BM.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | iffb-1 | ||||||||
| DB_info | Database | AceView | gene | 3D415 | |||||
| WormQTL | gene | WBGene00021857 | |||||||
| WormFlux | gene | WBGene00021857 | |||||||
| NDB | locus_tag | CELE_Y54F10BM.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021857|UniProtKB=G5EGT7 | |||||||
| family | PTHR43381 | ||||||||
| NCBI | gene | 175353 | |||||||
| RefSeq | protein | NM_065135.9 | |||||||
| TREEFAM | TREEFAM_ID | TF101535 | |||||||
| TrEMBL | UniProtAcc | G5EGT7 | |||||||
| UniProt_GCRP | UniProtAcc | G5EGT7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 06 Apr 2006 09:26:55 | WBPerson2970 | Name_change | CGC_name | iffb-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | iffb | ||||||||
| Allele (278) | |||||||||
| Strain | WBStrain00007152 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00020886 | ||||||||
| 00020887 | |||||||||
| 00020888 | |||||||||
| 00020889 | |||||||||
| 00020890 | |||||||||
| 00020891 | |||||||||
| 00126066 | |||||||||
| 00126067 | |||||||||
| Ortholog (44) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to enable translation initiation factor activity. Predicted to be involved in translational initiation. Predicted to be located in cytoplasm. Is an ortholog of human EIF5B (eukaryotic translation initiation factor 5B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54F10BM.2 | |||||||
| Corresponding_CDS_history | Y54F10BM.2:wp190 | ||||||||
| Corresponding_transcript | Y54F10BM.2.1 | ||||||||
| Other_sequence (92) | |||||||||
| Associated_feature | WBsf644976 | ||||||||
| WBsf991494 | |||||||||
| WBsf991495 | |||||||||
| WBsf1014387 | |||||||||
| WBsf1014388 | |||||||||
| WBsf1014389 | |||||||||
| WBsf1014390 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00007332 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057415 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr12451 | ||||||||
| Expr1026112 | |||||||||
| Expr1039599 | |||||||||
| Expr1160847 | |||||||||
| Expr2012693 | |||||||||
| Expr2030929 | |||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (108) | |||||||||
| Interaction (183) | |||||||||
| Map_info | Map | III | Position | -14.7633 | Error | 0.006794 | |||
| Positive | Positive_clone | Y54F10BM | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00010618 | ||||||||
| WBPaper00027281 | |||||||||
| WBPaper00028443 | |||||||||
| WBPaper00028451 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00055602 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
