WormBase Tree Display for Gene: WBGene00021871
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WBGene00021871 | SMap | S_parent | Sequence | Y54G2A | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | dml-1 | Person_evidence | WBPerson600 | |||
Sequence_name | Y54G2A.5 | ||||||
Molecular_name | Y54G2A.5a | ||||||
Y54G2A.5a.1 | |||||||
CE48099 | |||||||
Y54G2A.5b | |||||||
CE33889 | |||||||
Y54G2A.5c | |||||||
CE48813 | |||||||
Y54G2A.5b.1 | |||||||
Y54G2A.5c.1 | |||||||
Other_name | CELE_Y54G2A.5 | Accession_evidence | NDB | BX284604 | |||
Public_name | dml-1 | ||||||
DB_info | Database | AceView | gene | 4D655C | |||
4D655 | |||||||
WormQTL | gene | WBGene00021871 | |||||
WormFlux | gene | WBGene00021871 | |||||
NDB | locus_tag | CELE_Y54G2A.5 | |||||
NCBI | gene | 177071 | |||||
RefSeq | protein | NM_001307325.3 | |||||
NM_001028334.8 | |||||||
NM_001028335.5 | |||||||
TREEFAM | TREEFAM_ID | TF352921 | |||||
TrEMBL | UniProtAcc | Q8WTL0 | |||||
H2L0Q9 | |||||||
U4PDW4 | |||||||
UniProt_GCRP | UniProtAcc | Q8WTL0 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | dml | ||||||
Allele (67) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog (13) | |||||||
Paralog | WBGene00010779 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Structured_description | Automated_description | Enriched in muscle cell based on microarray studies. Is affected by several genes including daf-2; eat-2; and sek-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including rotenone; Rifampin; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y54G2A.5a | |||||
Y54G2A.5b | |||||||
Y54G2A.5c | |||||||
Corresponding_CDS_history | Y54G2A.5a:wp236 | ||||||
Corresponding_transcript | Y54G2A.5a.1 | ||||||
Y54G2A.5b.1 | |||||||
Y54G2A.5c.1 | |||||||
Associated_feature | WBsf659820 | ||||||
WBsf660007 | |||||||
WBsf660008 | |||||||
WBsf981701 | |||||||
WBsf995803 | |||||||
WBsf995804 | |||||||
WBsf1016972 | |||||||
WBsf228066 | |||||||
Experimental_info | RNAi_result | WBRNAi00000667 | Inferred_automatically | RNAi_primary | |||
WBRNAi00057470 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1014015 | ||||||
Expr1039605 | |||||||
Expr1160913 | |||||||
Expr2010961 | |||||||
Expr2029200 | |||||||
Microarray_results (13) | |||||||
Expression_cluster (100) | |||||||
Map_info | Map | IV | Position | -6.72516 | Error | 0.000996 | |
Positive | Positive_clone | Y54G2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |