WormBase Tree Display for Gene: WBGene00021871
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| WBGene00021871 | SMap | S_parent | Sequence | Y54G2A | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | dml | ||||||
| Allele (67) | |||||||
| RNASeq_FPKM (74) | |||||||
| Ortholog (13) | |||||||
| Paralog | WBGene00010779 | Caenorhabditis elegans | From_analysis | TreeFam | |||
| Structured_description | Automated_description | Enriched in muscle cell based on microarray studies. Is affected by several genes including daf-2; eat-2; and sek-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including rotenone; Rifampin; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | Y54G2A.5a | |||||
| Y54G2A.5b | |||||||
| Y54G2A.5c | |||||||
| Corresponding_CDS_history | Y54G2A.5a:wp236 | ||||||
| Corresponding_transcript | Y54G2A.5a.1 | ||||||
| Y54G2A.5b.1 | |||||||
| Y54G2A.5c.1 | |||||||
| Associated_feature | WBsf659820 | ||||||
| WBsf660007 | |||||||
| WBsf660008 | |||||||
| WBsf981701 | |||||||
| WBsf995803 | |||||||
| WBsf995804 | |||||||
| WBsf1016972 | |||||||
| WBsf228066 | |||||||
| Experimental_info | RNAi_result | WBRNAi00000667 | Inferred_automatically | RNAi_primary | |||
| WBRNAi00057470 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1014015 | ||||||
| Expr1039605 | |||||||
| Expr1160913 | |||||||
| Expr2010961 | |||||||
| Expr2029200 | |||||||
| Microarray_results (13) | |||||||
| Expression_cluster (100) | |||||||
| Map_info | Map | IV | Position | -6.72516 | Error | 0.000996 | |
| Positive | Positive_clone | Y54G2A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Pseudo_map_position | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
