WormBase Tree Display for Gene: WBGene00021909
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| WBGene00021909 | SMap | S_parent | Sequence | Y55B1BL | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | Y55B1BL.1 | |||||||
| Molecular_name | Y55B1BL.1a | ||||||||
| Y55B1BL.1a.1 | |||||||||
| CE41731 | |||||||||
| Y55B1BL.1b | |||||||||
| CE50278 | |||||||||
| Y55B1BL.1a.2 | |||||||||
| Y55B1BL.1b.1 | |||||||||
| Y55B1BL.1c | |||||||||
| Other_name | Y55B1BL.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y55B1BL.1 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | Y55B1BL.1 | ||||||||
| DB_info | Database | AceView | gene | 3B23 | |||||
| WormQTL | gene | WBGene00021909 | |||||||
| WormFlux | gene | WBGene00021909 | |||||||
| NDB | locus_tag | CELE_Y55B1BL.1 | |||||||
| NCBI | gene | 175199 | |||||||
| RefSeq | protein | NM_064795.7 | |||||||
| NR_132447.1 | |||||||||
| NM_001312980.3 | |||||||||
| TrEMBL | UniProtAcc | A0A0K3AU90 | |||||||
| Q9N381 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9N381 | |||||||
| RNAcentral | URSid | URS000085E455 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 02 Mar 2018 11:09:16 | WBPerson4025 | Event | Split_into | WBGene00303093 | ||||
| Split_into | WBGene00303093 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (78) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (19) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABarpaapap; ABarpaappa; excretory system; hypodermis; and neurons based on microarray; tiling array; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and glp-1 based on microarray and RNA-seq studies. Is affected by eighteen chemicals including Rifampin; D-glucose; and stavudine based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y55B1BL.1a | |||||||
| Y55B1BL.1b | |||||||||
| Corresponding_CDS_history | Y55B1BL.1:wp183 | ||||||||
| Y55B1BL.1d:wp264 | |||||||||
| Corresponding_transcript | Y55B1BL.1c | ||||||||
| Y55B1BL.1a.1 | |||||||||
| Y55B1BL.1a.2 | |||||||||
| Y55B1BL.1b.1 | |||||||||
| Other_sequence | CBC06408_1 | ||||||||
| CJC01506_1 | |||||||||
| CBC15250_1 | |||||||||
| Associated_feature | WBsf644912 | ||||||||
| WBsf1014060 | |||||||||
| WBsf224360 | |||||||||
| WBsf224361 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037508 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057502 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021015 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023633 | ||||||||
| Expr1039624 | |||||||||
| Expr1160938 | |||||||||
| Expr2007969 | |||||||||
| Expr2026211 | |||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (201) | |||||||||
| Interaction | WBInteraction000581238 | ||||||||
| Map_info | Positive | Positive_clone | Y55B1BL | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -26.8743 | |||||||
| Method | Gene |
