WormBase Tree Display for Gene: WBGene00021956
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| WBGene00021956 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y57E12AL.1 | |||||||
| Molecular_name | Y57E12AL.1a | ||||||||
| Y57E12AL.1a.1 | |||||||||
| CE29890 | |||||||||
| Y57E12AL.1b | |||||||||
| CE52440 | |||||||||
| Y57E12AL.1a.2 | |||||||||
| Y57E12AL.1b.1 | |||||||||
| Y57E12AL.1b.2 | |||||||||
| Other_name | Y57E12AL.f | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| Y57E12AM.a | Curator_confirmed | WBPerson1983 | |||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y57E12AL.1 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | Y57E12AL.1 | ||||||||
| DB_info | Database | AceView | gene | 5H541 | |||||
| WormQTL | gene | WBGene00021956 | |||||||
| WormFlux | gene | WBGene00021956 | |||||||
| NDB | locus_tag | CELE_Y57E12AL.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021956|UniProtKB=Q95XV3 | |||||||
| family | PTHR10383 | ||||||||
| NCBI | gene | 179093 | |||||||
| RefSeq | protein | NM_001383330.2 | |||||||
| NM_171479.9 | |||||||||
| TREEFAM | TREEFAM_ID | TF312881 | |||||||
| TrEMBL | UniProtAcc | Q95XV3 | |||||||
| H2KZT9 | |||||||||
| UniProt_GCRP | UniProtAcc | Q95XV3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (41) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00022526 | ||||||||
| 00022527 | |||||||||
| 00022528 | |||||||||
| 00126148 | |||||||||
| Contained_in_operon | CEOP5534 | ||||||||
| Ortholog (48) | |||||||||
| Paralog | WBGene00011250 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Is an ortholog of human SERINC1 (serine incorporator 1) and SERINC3 (serine incorporator 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y57E12AL.1a | |||||||
| Y57E12AL.1b | |||||||||
| Corresponding_CDS_history | Y57E12AL.1b:wp262 | ||||||||
| Corresponding_transcript | Y57E12AL.1a.1 | ||||||||
| Y57E12AL.1a.2 | |||||||||
| Y57E12AL.1b.1 | |||||||||
| Y57E12AL.1b.2 | |||||||||
| Other_sequence (81) | |||||||||
| Associated_feature | WBsf646912 | ||||||||
| WBsf646913 | |||||||||
| WBsf661402 | |||||||||
| WBsf231932 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00057659 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00009398 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021121 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026594 | ||||||||
| Expr1039659 | |||||||||
| Expr1161067 | |||||||||
| Expr2008033 | |||||||||
| Expr2026273 | |||||||||
| Drives_construct | WBCnstr00024392 | ||||||||
| Construct_product | WBCnstr00024392 | ||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (102) | |||||||||
| Interaction | WBInteraction000465166 | ||||||||
| WBInteraction000581244 | |||||||||
| Map_info | Positive | Positive_clone | Y57E12AL | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 0.504789 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
