WormBase Tree Display for Gene: WBGene00022114
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| WBGene00022114 | SMap | S_parent | Sequence | Y71F9AL | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y71F9AL.9 | |||||||
| Molecular_name | Y71F9AL.9 | ||||||||
| Y71F9AL.9.1 | |||||||||
| CE22858 | |||||||||
| Other_name | CELE_Y71F9AL.9 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | Y71F9AL.9 | ||||||||
| DB_info | Database | AceView | gene | 1D445 | |||||
| WormQTL | gene | WBGene00022114 | |||||||
| WormFlux | gene | WBGene00022114 | |||||||
| NDB | locus_tag | CELE_Y71F9AL.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022114|UniProtKB=Q9N4I3 | |||||||
| family | PTHR15623 | ||||||||
| NCBI | gene | 171854 | |||||||
| RefSeq | protein | NM_001381536.1 | |||||||
| TREEFAM | TREEFAM_ID | TF320553 | |||||||
| TrEMBL | UniProtAcc | Q9N4I3 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N4I3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (26) | |||||||||
| Strain | WBStrain00003534 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP1068 | ||||||||
| Ortholog (32) | |||||||||
| Structured_description | Automated_description | Enriched in anal depressor muscle; germ line; hermaphrodite distal tip cell; intestine; and male distal tip cell based on proteomic; Chronogram; and single-cell RNA-seq studies. Is affected by several genes including daf-12; hsf-1; and sir-2.1 based on microarray; RNA-seq; proteomic; and tiling array studies. Is affected by eight chemicals including silicon dioxide nanoparticle; paraquat; and Atrazine based on microarray and RNA-seq studies. Human SPATS2L enables RNA binding activity. Is predicted to encode a protein with the following domains: SPATS2-like; Phosphorylation site; and UBA-like superfamily. Is an ortholog of human SPATS2L (spermatogenesis associated serine rich 2 like). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y71F9AL.9 | |||||||
| Corresponding_transcript | Y71F9AL.9.1 | ||||||||
| Other_sequence (46) | |||||||||
| Associated_feature | WBsf643113 | ||||||||
| WBsf643114 | |||||||||
| WBsf654774 | |||||||||
| WBsf656086 | |||||||||
| WBsf983011 | |||||||||
| WBsf1009422 | |||||||||
| WBsf217344 | |||||||||
| WBsf217345 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00004799 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00058165 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram530 | ||||||||
| Expr7107 | |||||||||
| Expr1027420 | |||||||||
| Expr1039729 | |||||||||
| Expr1161583 | |||||||||
| Expr2008285 | |||||||||
| Expr2026525 | |||||||||
| Drives_construct | WBCnstr00003988 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (138) | |||||||||
| Interaction (27) | |||||||||
| Map_info | Positive | Positive_clone | Y71F9AL | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | -5.30814 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00056909 | |||||||||
| Method | Gene |
