WormBase Tree Display for Gene: WBGene00022251
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| WBGene00022251 | SMap | S_parent | Sequence | Y73B6BL | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | blos-2 | Person_evidence | WBPerson253 | |||||
| Sequence_name | Y73B6BL.30 | ||||||||
| Molecular_name | Y73B6BL.30a | ||||||||
| Y73B6BL.30a.1 | |||||||||
| CE29005 | |||||||||
| Y73B6BL.30b | |||||||||
| CE49291 | |||||||||
| Y73B6BL.30b.1 | |||||||||
| Other_name | CELE_Y73B6BL.30 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | blos-2 | ||||||||
| DB_info | Database | AceView | gene | 4H99 | |||||
| WormQTL | gene | WBGene00022251 | |||||||
| WormFlux | gene | WBGene00022251 | |||||||
| NDB | locus_tag | CELE_Y73B6BL.30 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022251|UniProtKB=Q95XD3 | |||||||
| family | PTHR46479 | ||||||||
| NCBI | gene | 177395 | |||||||
| RefSeq | protein | NM_001380271.1 | |||||||
| NM_068566.6 | |||||||||
| SwissProt | UniProtAcc | Q95XD3 | |||||||
| TrEMBL | UniProtAcc | V6CLS1 | |||||||
| UniProt_GCRP | UniProtAcc | Q95XD3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 31 Aug 2012 11:56:39 | WBPerson2970 | Name_change | CGC_name | blos-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | blos | ||||||||
| Allele (14) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00088923 | ||||||||
| 00088924 | |||||||||
| 00088925 | |||||||||
| 00088926 | |||||||||
| 00088927 | |||||||||
| 00088928 | |||||||||
| 00088929 | |||||||||
| 00088930 | |||||||||
| Contained_in_operon | CEOP4176 | ||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00235289 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00018146 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable gamma-tubulin binding activity. Involved in endosomal transport. Predicted to be part of BLOC-1 complex; BORC complex; and gamma-tubulin complex. Expressed in head. Is an ortholog of human BLOC1S2 (biogenesis of lysosomal organelles complex 1 subunit 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y73B6BL.30a | |||||||
| Y73B6BL.30b | |||||||||
| Corresponding_transcript | Y73B6BL.30a.1 | ||||||||
| Y73B6BL.30b.1 | |||||||||
| Other_sequence (20) | |||||||||
| Associated_feature | WBsf034299 | ||||||||
| WBsf646012 | |||||||||
| WBsf228402 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00022559 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001122 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058332 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1099 | ||||||||
| Expr7116 | |||||||||
| Expr1020956 | |||||||||
| Expr1039812 | |||||||||
| Expr1161742 | |||||||||
| Expr2009635 | |||||||||
| Expr2027874 | |||||||||
| Drives_construct | WBCnstr00004529 | ||||||||
| WBCnstr00024315 | |||||||||
| Construct_product | WBCnstr00024315 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (107) | |||||||||
| Interaction | WBInteraction000198428 | ||||||||
| WBInteraction000325175 | |||||||||
| WBInteraction000333420 | |||||||||
| WBInteraction000411572 | |||||||||
| WBInteraction000579159 | |||||||||
| WBInteraction000579185 | |||||||||
| Map_info | Map | IV | Position | 3.17028 | |||||
| Positive | Positive_clone | Y73B6BL | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00052655 | |||||||||
| WBPaper00052935 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064980 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
