WormBase Tree Display for Gene: WBGene00022332
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| WBGene00022332 | SMap | S_parent | Sequence | Y82E9BL | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | fbxa-20 | Person_evidence | WBPerson655 | ||||||
| Sequence_name | Y82E9BL.16 | |||||||||
| Molecular_name | Y82E9BL.16 | |||||||||
| Other_name | CELE_Y82E9BL.16 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | fbxa-20 | |||||||||
| DB_info | Database | AceView | gene | 3C398 | ||||||
| WormQTL | gene | WBGene00022332 | ||||||||
| WormFlux | gene | WBGene00022332 | ||||||||
| NDB | locus_tag | CELE_Y82E9BL.16 | ||||||||
| NCBI | gene | 190763 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 12 Dec 2005 15:18:56 | WBPerson2970 | Name_change | CGC_name | fbxa-20 | |||||
| 3 | 20 Jan 2020 12:22:03 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | fbxa | |||||||||
| Allele (127) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog (39) | ||||||||||
| Paralog (218) | ||||||||||
| Structured_description | Automated_description | Enriched in AVE; GABAergic neurons; and hypodermis based on tiling array and RNA-seq studies. Is affected by several genes including eat-2; clk-1; and pgl-1 based on microarray and RNA-seq studies. Is affected by Colistin based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | Y82E9BL.16:wp275 | ||||||||
| Corresponding_pseudogene | Y82E9BL.16 | |||||||||
| Other_sequence | CBC16835_1 | |||||||||
| Experimental_info | Expr_pattern | Expr1016295 | ||||||||
| Expr1161979 | ||||||||||
| Expr2011519 | ||||||||||
| Expr2029756 | ||||||||||
| Drives_construct | WBCnstr00024274 | |||||||||
| Construct_product | WBCnstr00024274 | |||||||||
| Microarray_results (11) | ||||||||||
| Expression_cluster (50) | ||||||||||
| Map_info | Map | III | Position | -22.3772 | Error | 0.014555 | ||||
| Positive | Positive_clone | Y82E9BL | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
