WormBase Tree Display for Gene: WBGene00022360
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| WBGene00022360 | SMap | S_parent | Sequence | Y92H12A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | ints-3 | Person_evidence | WBPerson5934 | |||||
| Sequence_name | Y92H12A.4 | ||||||||
| Molecular_name (11) | |||||||||
| Other_name | CELE_Y92H12A.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | ints-3 | ||||||||
| DB_info | Database | AceView | gene | 1B999 | |||||
| WormQTL | gene | WBGene00022360 | |||||||
| WormFlux | gene | WBGene00022360 | |||||||
| NDB | locus_tag | CELE_Y92H12A.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022360|UniProtKB=W6RQY9 | |||||||
| family | PTHR13587 | ||||||||
| NCBI | gene | 3565441 | |||||||
| RefSeq | protein | NM_001381224.1 | |||||||
| NM_001381223.1 | |||||||||
| NR_131345.1 | |||||||||
| NM_001306494.2 | |||||||||
| TrEMBL | UniProtAcc | W6RQY9 | |||||||
| W6RRX0 | |||||||||
| W6RY35 | |||||||||
| UniProt_GCRP | UniProtAcc | W6RQY9 | |||||||
| RNAcentral | URSid | URS00004F90C8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 06 Jan 2014 14:11:37 | WBPerson1983 | Event | Acquires_merge | WBGene00022359 | ||||
| 3 | 20 May 2019 14:10:26 | WBPerson1983 | Name_change | CGC_name | ints-3 | ||||
| Acquires_merge | WBGene00022359 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ints | ||||||||
| Allele (810) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00105445 | ||||||||
| Ortholog (37) | |||||||||
| Structured_description | Automated_description | Predicted to be located in cytoplasm. Is an ortholog of human INTS3 (integrator complex subunit 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y92H12A.4a | |||||||
| Y92H12A.4c | |||||||||
| Y92H12A.4d | |||||||||
| Corresponding_CDS_history | Y92H12A.4:wp88 | ||||||||
| Y92H12A.4:wp124 | |||||||||
| Y92H12A.4:wp241 | |||||||||
| Corresponding_transcript | Y92H12A.4b | ||||||||
| Y92H12A.4a.1 | |||||||||
| Y92H12A.4a.2 | |||||||||
| Y92H12A.4c.1 | |||||||||
| Y92H12A.4d.1 | |||||||||
| Other_sequence (21) | |||||||||
| Associated_feature | WBsf643051 | ||||||||
| WBsf655929 | |||||||||
| WBsf655930 | |||||||||
| WBsf982711 | |||||||||
| WBsf982712 | |||||||||
| WBsf1009223 | |||||||||
| WBsf1009224 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00117125 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00058630 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058629 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026828 | ||||||||
| Expr1029022 | |||||||||
| Expr1039865 | |||||||||
| Expr1039866 | |||||||||
| Expr1162048 | |||||||||
| Expr1162049 | |||||||||
| Expr2008499 | |||||||||
| Expr2026737 | |||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (101) | |||||||||
| Interaction | WBInteraction000549219 | ||||||||
| WBInteraction000559700 | |||||||||
| WBInteraction000560313 | |||||||||
| WBInteraction000575044 | |||||||||
| WBInteraction000575514 | |||||||||
| Map_info | Map | I | Position | -14.5987 | |||||
| Positive | Positive_clone | Y92H12A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006241 | ||||||||
| WBPaper00026935 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056284 | |||||||||
| WBPaper00058250 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
